Aniseed - Transcript Card

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S6.g00133.01.t

Possible name(s)

CELSR3; CRB1; CRB2

Gene model

Phfumi.CG.MTP2014.S6.g00133

Location

S6 [68,059 / 70,909]

Sequences

Amino acid sequence

Length: 421

>Phfumi.CG.MTP2014.S6.g00133.01.p
SCICLPGYQGDSCEEHIVPENDDIEDACVPNPCENECQCKPSCKHELGYVCVSETGFIGK
NCDIPVPKVACLENEIVVDVSTDFFNEFDARIRNAYMYIAPSEDSKEKSNVQCQASQVGD
FMEVSILLPFNDCGTSMDNSKSGSSGVTFMNRLWVNRGGSELFDMPVPVLDFTCVYDRNY
SVVTSLMPKIDTVDRQITRSGNFDLRYGLCKIPLCDGIGECPDIYKVGREEEPAVYTVGQ
MLHFHVKVLTMHDILFQKTLVSTLEELFLSCESDPYQPNLVTIASLGCPVPTAFATSVSA
GLVDNPQSVCASLQVPRATSSGCKTVYLHARVRLCDKNQLRVCNSDQSVLYCASSRKRRS
ADSDESAYFAIGPINVIRGSKGKAVEQLHIGDGYGGVITVTAEPDVASVDSEKTEANTPS
E

Nucleotide sequence

Length: 1,263

>Phfumi.CG.MTP2014.S6.g00133.01.t
AGTTGCATTTGTCTACCGGGTTACCAAGGCGACAGTTGCGAGGAGCATATAGTTCCCGAA
AACGATGATATCGAAGACGCGTGCGTTCCCAATCCGTGTGAAAATGAGTGCCAGTGTAAA
CCATCGTGCAAGCACGAGCTTGGTTACGTCTGTGTCAGCGAGACTGGATTTATTGGAAAG
AATTGCGATATTCCCGTTCCGAAGGTAGCGTGTCTAGAGAATGAAATCGTAGTAGACGTT
TCCACCGATTTTTTCAACGAGTTTGATGCGAGAATACGAAATGCCTATATGTATATCGCT
CCATCCGAAGATTCAAAAGAAAAATCGAACGTACAATGCCAAGCGTCGCAAGTCGGTGAC
TTCATGGAAGTGTCAATTTTATTACCCTTTAACGACTGTGGGACATCAATGGACAATTCT
AAGAGCGGTTCAAGCGGTGTGACGTTCATGAACCGTTTGTGGGTAAATCGTGGGGGTAGC
GAGCTTTTCGACATGCCTGTGCCGGTGCTCGACTTCACCTGTGTCTATGACAGGAATTAC
TCGGTTGTAACGTCACTTATGCCAAAAATCGATACAGTGGACCGACAGATTACCCGCAGT
GGGAACTTTGATCTTCGCTATGGTTTGTGTAAAATTCCACTTTGTGACGGAATAGGGGAA
TGCCCGGACATTTACAAGGTCGGCAGGGAAGAGGAACCAGCTGTGTACACTGTCGGACAG
ATGTTGCATTTCCACGTGAAGGTCTTGACCATGCATGATATATTGTTTCAAAAAACACTG
GTGAGCACATTGGAGGAATTGTTTCTTTCCTGCGAATCGGATCCTTATCAACCCAACCTG
GTGACTATCGCATCACTGGGATGTCCTGTCCCGACTGCATTCGCAACGTCGGTTTCGGCA
GGTTTGGTCGACAACCCGCAATCCGTTTGCGCCTCCCTACAAGTGCCGCGGGCGACATCT
AGCGGATGTAAAACTGTCTATTTGCACGCCAGGGTCCGCCTATGTGACAAGAACCAGCTT
AGGGTTTGCAACAGCGACCAGAGTGTGTTGTACTGCGCTTCCAGCCGAAAGCGTCGTAGT
GCTGATAGCGATGAGTCCGCCTACTTCGCCATCGGCCCCATCAACGTCATACGAGGTTCG
AAGGGCAAGGCGGTGGAACAGTTGCACATTGGGGACGGCTACGGTGGCGTGATCACTGTC
ACGGCGGAACCCGATGTTGCCAGCGTCGACTCGGAGAAAACTGAAGCTAACACGCCATCG
GAA

InterProScan

ProSiteProfiles	EGF-like_dom (IPR000742) - T[1-14] 10.704
ProSitePatterns	EGF-like_CS (IPR013032) - T[2-13] . - T[2-13] .
ProSiteProfiles	ZP_dom (IPR001507) - T[70-350] 16.928
SMART	ZP_dom (IPR001507) - T[70-346] 0.006
Pfam	ZP_dom (IPR001507) - T[71-339] 3.1E-20

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value