- Transcript 'KH2012:KH.C2.36.v2.A...' >
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- Transcript 'Phfumi.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S6911.g07550.01.t
Possible name(s)
POC1A; TBL1XR1; THOC3
Gene model
Location
S6911 [1,753 / 4,478]
Amino acid sequence
Length: 332
>Phfumi.CG.MTP2014.S6911.g07550.01.p
EKLQEHFKSNGKTKEHSAHSAKVHSVAWNSDGKKLASGSYDQTVSVYVLDRDRMSKDFTC
KGHSDSVDQLCWHPTSSDVFATASGDKTVRIWDARSGKCSSTINTKGENINICWSPNGQS
IAVGNKDDLVTFIDTKNFKAKAHEQFKVEVNEIAWNNTNDLFFLTTGQGTVQIYSYPDLK
LVQSLYGHTANCICIEFDATGKYFATGSADALMNLWDVAELVCIRTFSRLDWPVRTLSFS
HDGLMLASASEDHFIDISHVETGEKICEVKWKHNQTLFLLQLCQIFYQVACDSPTFTVAW
HPKNKLLAFACDDKDKYSRDAGTVKLFGLPND
Nucleotide sequence
Length: 999
>Phfumi.CG.MTP2014.S6911.g07550.01.t
GAAAAACTTCAGGAACATTTTAAGTCGAACGGGAAGACGAAAGAACATTCTGCTCATTCT
GCAAAAGTTCATTCCGTCGCTTGGAACTCCGATGGAAAAAAGCTTGCCTCTGGTTCCTAT
GACCAAACTGTCTCCGTTTACGTATTGGATCGAGATCGTATGAGCAAAGATTTCACATGC
AAAGGTCACTCAGACAGTGTTGACCAATTATGTTGGCATCCAACAAGCTCAGATGTATTT
GCAACAGCGTCAGGTGACAAAACTGTTCGTATATGGGATGCAAGATCAGGAAAGTGTTCA
TCAACAATCAACACCAAAGGTGAAAACATCAATATTTGCTGGAGCCCAAATGGTCAAAGT
ATCGCCGTTGGCAACAAGGATGACTTGGTCACATTTATTGACACAAAAAATTTTAAGGCA
AAAGCCCATGAACAATTCAAAGTGGAGGTGAATGAAATTGCATGGAACAACACCAATGAT
CTGTTTTTCCTCACAACTGGTCAGGGCACAGTTCAAATATACAGTTACCCAGACCTGAAA
CTGGTTCAATCCCTGTATGGTCACACAGCCAACTGTATTTGCATTGAATTCGATGCAACT
GGTAAATATTTTGCCACCGGGAGTGCTGATGCTCTTATGAATTTGTGGGATGTTGCTGAA
TTGGTTTGTATCAGAACGTTTTCAAGGTTGGACTGGCCTGTAAGGACCCTCAGTTTCAGT
CATGATGGCTTGATGCTTGCATCAGCATCCGAGGACCATTTTATAGATATCTCACATGTG
GAAACTGGTGAAAAGATATGTGAGGTAAAGTGGAAACATAACCAAACACTCTTTCTACTG
CAACTGTGCCAAATATTTTACCAGGTTGCTTGTGATTCCCCCACCTTTACTGTAGCTTGG
CATCCGAAAAACAAACTTTTGGCATTTGCCTGTGATGATAAGGACAAATACAGTAGAGAC
GCTGGAACTGTCAAGTTGTTTGGATTGCCGAATGACTGA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[6-143] 1.9E-32 - T[144-331] 5.6E-27 |
| SMART |
WD40_repeat (IPR001680) - T[9-48] 3.9E-6 - T[53-93] 3.4E-9 - T[96-134] 2.1 - T[135-175] 140.0 - T[178-217] 8.4E-7 - T[220-259] 0.4 - T[279-328] 130.0 |
| Pfam |
WD40_repeat (IPR001680) - T[15-47] 4.9E-5 - T[59-93] 1.7E-4 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[16-57] 11.712 - T[60-102] 14.819 - T[185-226] 12.647 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[16-268] 29.187 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[21-314] 1.69E-60 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[35-49] 1.1E-5 - T[80-94] 1.1E-5 - T[204-218] 1.1E-5 |
| Pfam |
TIF_beta_prop-like (IPR013979) - T[98-208] 5.1E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| POC1A_HUMAN | 27.404 % | 87.4 | 3.5E-19 |
| TBL1R_HUMAN | 28.235 % | 87 | 5.9E-19 |
| THOC3_HUMAN | 66.967 % | 468 | 5.88E-167 |