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  1. Transcript 'Phfumi.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S6790.g07498.01.t

Possible name(s)

RAB18; RAB2A; RAB2B

Gene model

Phfumi.CG.MTP2014.S6790.g07498

Location

S6790 [4,037 / 5,173]

Sequences

Amino acid sequence

Length: 199

>Phfumi.CG.MTP2014.S6790.g07498.01.p
MDGDDILTTLKILIIGDSGVGKSSLLLRFTDDKFDPDQSATIGVDFKVKSLTIDGNTVKL
AIWDTAGQERFRTLTPSYYRGAQGVIFVYDCTRKDTFNRLDSWLTEVDTYSTKSTIKMLV
GNKIDKEGRVVTRDEGLKFARRHRMLFIEASAKTRDGVEYAFEELVEKIIQTPGLWEHDG
GGKKLHLDSDQPQAGLCSC

Nucleotide sequence

Length: 600

>Phfumi.CG.MTP2014.S6790.g07498.01.t
ATGGACGGCGACGATATTTTAACCACCTTGAAGATTTTAATTATTGGAGATAGTGGTGTC
GGAAAATCAAGTTTGTTGCTGAGATTTACTGATGACAAATTCGACCCTGACCAATCAGCA
ACAATCGGTGTTGATTTTAAAGTGAAGTCACTTACAATTGATGGAAACACAGTAAAATTA
GCAATTTGGGACACTGCTGGCCAGGAACGATTCCGCACTTTGACCCCAAGCTATTATCGT
GGAGCACAAGGGGTTATATTTGTGTATGATTGCACGCGGAAAGATACCTTCAACCGTTTG
GATTCATGGCTAACAGAAGTTGATACATATTCCACAAAGTCCACAATTAAAATGTTGGTA
GGAAACAAGATTGACAAGGAAGGCAGAGTGGTTACACGTGATGAAGGTTTAAAATTTGCC
AGACGTCACCGAATGTTGTTTATTGAGGCCAGCGCCAAAACAAGGGATGGTGTCGAATAT
GCTTTTGAAGAGCTTGTTGAAAAAATTATCCAAACCCCTGGATTATGGGAACACGATGGG
GGTGGCAAAAAACTACATCTTGACTCCGATCAGCCACAAGCTGGTCTATGTTCCTGTTAA

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[9-174] 8.14E-57
TIGRFAM
Small_GTP-bd_dom (IPR005225) - T[9-164] 1.4E-31
Pfam
Small_GTPase (IPR001806) - T[11-170] 1.1E-56

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RAB18_HUMAN 75.676 % 286 9.67E-100
RAB2A_HUMAN 53.939 % 178 6.24E-57
RAB2B_HUMAN 53.293 % 176 8.51E-56