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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C2.216.v2....' > 
  2. Transcript 'KH2012:KH.C2.216.v1....' > 
  3. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  4. Transcript 'Phmamm.CG.MTP2014.S3...' > 
  5. Transcript 'Phfumi.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S6663.g07448.03.t

Possible name(s)

RPL18A

Gene model

Phfumi.CG.MTP2014.S6663.g07448

Location

S6663 [5,064 / 7,841]

Sequences

Amino acid sequence

Length: 186

>Phfumi.CG.MTP2014.S6663.g07448.03.p
ARYRRTARMKAKGELREYRVVGRKLPSEAVPNPPLFRMRLFASNHVAAKSRFWYFLSYYK
KVKKNAGEILQCSKIAEKSPGCVKNFGIWLRYDSRSGTHNMYREYRDVKVANAVTACYRD
MGARHRARPGSIQIMRVEQVSSSKCKRKHVKQFHDSHIRFPMPRMVMSKSQQNAPRFTTN
KPKLFF

Nucleotide sequence

Length: 561

>Phfumi.CG.MTP2014.S6663.g07448.03.t
GCCAGGTATCGACGAACGGCAAGGATGAAGGCGAAGGGAGAGTTGCGAGAATACAGAGTT
GTGGGAAGAAAACTGCCCTCAGAGGCAGTACCCAATCCACCCTTGTTTCGCATGCGACTG
TTTGCATCCAACCATGTCGCTGCCAAATCAAGATTTTGGTATTTCCTGTCATATTACAAG
AAAGTAAAGAAGAATGCAGGAGAAATATTACAGTGCAGTAAAATCGCTGAGAAGTCACCA
GGGTGTGTGAAAAACTTCGGAATCTGGCTTCGTTATGACTCGCGTAGTGGCACACATAAC
ATGTACAGGGAGTACAGAGATGTAAAGGTGGCCAACGCTGTCACTGCTTGTTATCGCGAT
ATGGGAGCTAGGCACAGAGCAAGACCTGGTAGCATTCAAATCATGAGGGTGGAGCAGGTT
TCATCATCGAAATGCAAGCGAAAACATGTCAAGCAATTCCATGACTCTCATATTCGCTTC
CCCATGCCACGTATGGTGATGAGCAAATCACAGCAGAACGCTCCAAGGTTTACCACAAAC
AAACCAAAGCTTTTCTTCTAA

InterProScan

PIRSF
Ribosomal_L18a/L20_eukaryotes (IPR021138) - T[9-186] 9.5E-69
PANTHER
50S_L18Ae/Ribosomal_L18a/L20 (IPR028877) - T[9-186] 1.2E-81
Pfam
Ribosomal_L18a//L18Ae/LX (IPR023573) - T[15-138] 1.8E-52
Hamap
50S_L18Ae/Ribosomal_L18a/L20 (IPR028877) - T[38-138] 36.754

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL18A_HUMAN 66.854 % 252 9.83E-87