Aniseed - Transcript Card

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S6517.g07393.02.t

Possible name(s)

RASSF2; RASSF4; RASSF6

Gene model

Phfumi.CG.MTP2014.S6517.g07393

Location

S6517 [2,728 / 8,210]

Sequences

Amino acid sequence

Length: 290

>Phfumi.CG.MTP2014.S6517.g07393.02.p
AFCSDNFLSRLSDYNTYYDGGAEKLAKRQNKKGELVVEGLLNIYWGLKTAIRLQLADDDE
KIRPRIQGEEGGEEENGAGNQLEVPGASGANLNVENAIWGKTRQRRNDRRRGALRLRVRD
PAKPETDSDEEGGSLARTSSVIMRKKGSRNLRHRASINGHSYNYRTSVFTPAFGSVTKVR
VTSQNNAHTVITKLFAKFRVENTPNDFSLYIVKETGERRELPGDEFPLLSRVLVGPNEKL
GKIFLQERKMHKEISPEVAQYIKLDTRILQVFLTKFAEEEDKEISKMRKR

Nucleotide sequence

Length: 873

>Phfumi.CG.MTP2014.S6517.g07393.02.t
GCGTTTTGCAGCGACAATTTTCTTTCACGGCTGAGCGATTACAATACGTACTACGACGGT
GGAGCAGAAAAGCTTGCAAAGCGACAGAATAAGAAGGGAGAGTTGGTTGTGGAAGGACTC
CTCAATATCTACTGGGGATTGAAAACGGCTATACGACTCCAGCTTGCCGATGACGATGAA
AAAATCAGACCCAGGATCCAAGGAGAGGAAGGAGGAGAGGAAGAAAACGGCGCAGGAAAC
CAACTAGAAGTTCCAGGCGCAAGCGGTGCCAACTTGAACGTGGAGAATGCGATTTGGGGC
AAAACCAGGCAACGCCGTAACGACCGAAGACGTGGAGCGTTGCGTCTTCGAGTTCGTGAT
CCCGCAAAGCCAGAGACAGACAGCGACGAAGAAGGAGGGAGCTTGGCACGTACCAGCAGC
GTCATCATGCGGAAAAAAGGATCTCGAAATTTGAGGCATAGAGCGTCGATCAACGGGCAC
TCTTACAACTACAGGACTTCAGTGTTCACTCCCGCCTTTGGTTCGGTGACGAAAGTTCGA
GTCACGAGTCAAAACAACGCTCACACCGTCATCACGAAGTTGTTCGCGAAATTCCGGGTG
GAGAACACACCGAATGATTTCTCGCTTTACATCGTTAAAGAGACCGGTGAACGTCGTGAG
CTGCCTGGTGACGAGTTTCCGCTTCTAAGTCGAGTGCTGGTCGGTCCCAACGAAAAACTC
GGCAAAATCTTTCTCCAGGAAAGAAAAATGCACAAGGAAATTTCTCCAGAGGTTGCTCAA
TACATCAAATTGGACACGAGGATCCTACAAGTTTTTCTCACAAAGTTTGCGGAAGAGGAA
GATAAAGAAATCAGCAAAATGAGAAAAAGGTAA

InterProScan

PANTHER	C-RASSF (IPR033614) - T[4-290] 3.1E-79
SMART	RA_dom (IPR000159) - T[160-250] 7.2E-6
ProSiteProfiles	RA_dom (IPR000159) - T[162-250] 17.027
Pfam	RA_dom (IPR000159) - T[167-249] 1.1E-11
SUPERFAMILY	Ubiquitin-like_domsf (IPR029071) - T[179-248] 1.58E-7

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RASF2_HUMAN	37.671 %	187	8.33E-58
RASF4_HUMAN	40.37 %	173	2.25E-52
RASF6_HUMAN	32.581 %	148	5.09E-42