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- Transcript 'Phfumi.CG.MTP2014.S3...' >
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Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S646.g02474.02.t
Possible name(s)
ARNT; ARNT2; ARNTL
Gene model
Location
S646 [5,202 / 12,181]
Amino acid sequence
Length: 563
>Phfumi.CG.MTP2014.S646.g02474.02.p
SRKSIEDMSQKEKEKFARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILR
MAVSHMKNLRGAMAGGMENNFKPSFLTDQELKHLVLEAADGFLFVTACDSSQVVYVSDTV
TAVLNQAHAEWNGHLLYDLIHPDDVGKVREQLCISESQNSGRVLDLKTGTVKKEGQQSSV
RMCMGSRRAFICRMRCGKHQMNMARPRYMRAQNTLGQPEDGKDAYVVMHVTGFIRAWPPA
GYGSEADAMDEVSLAAGNNSGNYCLVAVARLQITSHPGIDEISSSHEATEFVSRHGRDGA
FTFVDLRVTGVLGYQPQDLLTKMPSDFYHPEDVEHMKESFKQVLLLKGQVLTMSYRFRTQ
SGEYAWLRTSSFSFQNPYNNEVEYVVCTNTLVKQPGAEQHQVEVPNTAVPAEIKSMPTYA
HTASEQSPQVMQQYPMAQVAVKSPGTEMDYSPQQQFNSPTQAGWNHGAAVPATVSPYQPQ
QTVSERFAPNIAAQHNAGSVPYSSGSYQASPPVGMYPVTAAHHPIRDAYQQQEAMAAMME
PGAAAYTQADYNNLGMYTSYSES
Nucleotide sequence
Length: 1,692
>Phfumi.CG.MTP2014.S646.g02474.02.t
TCCAGAAAAAGTATTGAAGATATGTCACAAAAAGAAAAGGAAAAGTTTGCGAGAGAAAAC
CATTCTGAAATTGAAAGAAGACGAAGAAACAAAATGACAGCATACATCACTGAACTTTCT
GATATGGTCCCTACGTGTAGCGCACTTGCCAGAAAACCTGACAAACTGACAATTCTGCGC
ATGGCTGTTTCACACATGAAGAACCTGCGAGGTGCGATGGCAGGTGGAATGGAAAACAAC
TTCAAACCATCATTCCTCACAGACCAGGAACTGAAGCATCTTGTGCTTGAAGCTGCAGAT
GGATTTCTCTTCGTTACCGCATGCGATTCCAGCCAAGTTGTCTATGTTTCAGACACTGTG
ACCGCCGTACTCAATCAGGCACATGCTGAATGGAACGGGCACCTATTATACGACCTTATT
CATCCTGATGATGTTGGAAAAGTCAGAGAACAGTTATGCATTTCCGAATCCCAAAACTCA
GGTCGAGTGTTGGACCTGAAGACGGGCACAGTGAAAAAAGAAGGACAACAAAGCTCAGTA
AGGATGTGCATGGGATCAAGGAGAGCTTTTATATGTAGAATGAGATGTGGCAAGCATCAG
ATGAACATGGCACGACCAAGATACATGAGAGCACAAAATACCCTTGGTCAGCCTGAAGAT
GGGAAGGATGCTTATGTAGTGATGCATGTAACTGGTTTCATCCGCGCCTGGCCACCTGCA
GGTTATGGGTCAGAAGCTGACGCAATGGATGAAGTCTCACTTGCAGCTGGTAACAACTCT
GGCAACTACTGTCTTGTTGCTGTGGCAAGGCTGCAGATCACAAGCCATCCAGGCATTGAT
GAGATTAGTTCATCTCATGAGGCAACAGAGTTTGTCTCCAGACATGGAAGAGATGGTGCT
TTTACATTTGTAGATCTTCGGGTTACTGGAGTGCTTGGTTATCAACCTCAGGATCTTCTG
ACCAAGATGCCTTCTGATTTTTACCACCCAGAGGATGTTGAACACATGAAAGAGAGTTTT
AAACAAGTATTGCTGCTGAAGGGCCAGGTGCTGACCATGTCCTACAGATTTCGCACCCAA
TCAGGCGAATATGCATGGCTGAGGACCAGCTCCTTCTCCTTTCAGAATCCATACAACAAC
GAAGTGGAATACGTGGTGTGCACCAACACACTTGTCAAACAACCTGGTGCTGAACAGCAT
CAAGTAGAAGTTCCTAATACTGCTGTCCCTGCTGAGATCAAGTCCATGCCAACTTATGCC
CATACAGCCAGCGAGCAATCTCCGCAGGTCATGCAGCAATATCCTATGGCCCAAGTTGCA
GTCAAAAGCCCAGGGACGGAAATGGATTATTCTCCACAACAGCAATTTAACTCCCCCACT
CAAGCTGGATGGAACCATGGAGCGGCTGTTCCAGCTACAGTTAGCCCATATCAACCGCAG
CAAACAGTGTCGGAGCGCTTTGCACCAAATATAGCTGCTCAACATAATGCTGGATCAGTT
CCATATAGCTCTGGATCATACCAAGCCTCCCCACCAGTGGGCATGTATCCAGTAACTGCT
GCTCACCACCCTATAAGGGATGCTTACCAACAGCAGGAAGCCATGGCAGCAATGATGGAG
CCAGGAGCAGCTGCCTACACCCAAGCTGACTACAATAATCTGGGAATGTATACTTCCTAT
TCCGAATCTTGA
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[5-72] 2.1E-21 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[16-69] 16.952 |
| Pfam |
bHLH_dom (IPR011598) - T[18-69] 2.2E-13 |
| CDD |
bHLH_dom (IPR011598) - T[18-70] 5.29631E-15 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[18-99] 4.19E-15 |
| SMART |
bHLH_dom (IPR011598) - T[22-75] 4.9E-13 |
| PRINTS |
Nuc_translocat (IPR001067) - T[31-46] 1.7E-78 - T[51-71] 1.7E-78 - T[81-104] 1.7E-78 - T[106-125] 1.7E-78 - T[138-156] 1.7E-78 - T[184-197] 1.7E-78 - T[225-244] 1.7E-78 - T[290-307] 1.7E-78 |
| ProSiteProfiles |
PAS (IPR000014) - T[88-161] 11.391 - T[298-347] 12.614 |
| SMART |
PAS (IPR000014) - T[90-157] 3.7E-5 - T[279-345] 1.8E-5 |
| Pfam |
PAS_fold (IPR013767) - T[94-196] 3.5E-8 |
| CDD |
PAS (IPR000014) - T[99-188] 4.058E-7 - T[288-386] 1.93761E-14 |
| SUPERFAMILY |
PAS-like_dom_sf (IPR035965) - T[100-229] 1.21E-10 - T[290-391] 8.52E-26 |
| TIGRFAM |
PAS (IPR000014) - T[296-386] 1.2E-7 |
| SMART |
PAC (IPR001610) - T[352-395] 1.6E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARNT_HUMAN | 59.85 % | 509 | 4.84E-173 |
| ARNT2_HUMAN | 59.611 % | 498 | 1.24E-169 |
| BMAL1_HUMAN | 41.379 % | 332 | 1.79E-106 |