Aniseed - Transcript Card

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S6061.g07212.02.t

Possible name(s)

SCAMP1; SCAMP2; SCAMP3

Gene model

Phfumi.CG.MTP2014.S6061.g07212

Location

S6061 [1,558 / 2,970]

Sequences

Amino acid sequence

Length: 333

>Phfumi.CG.MTP2014.S6061.g07212.02.p
MGDFDANPFADPFKDGSVTQATSEADKANLDDFNPFANNENTTIPANSSAVMQPSNPPDY
GTNYAVSAPPVVAPPPTAPVPGHEELLRRQEELERKAEELQRREQQLSSANYNPRANNWP
PLPKWFPLRPCFYQDFTVDIPHEFQRTVKMLYYLWMFYVVALFLNVLSSLAAYIGCKTQN
LGTGFGLSILWWLLFTPCSLCWYRPAYKAFRSDSSFNFFLFFFMMFFQFCWSVLMCVGIE
NWGYAGWILAIACFGENLAVGIIVCIQATLFTVTAVFSLLLLKKTHSLYRTTGASFEKAQ
QEFATGVMKNPNVQNAAQNAASTAVQSSLKGQY

Nucleotide sequence

Length: 1,002

>Phfumi.CG.MTP2014.S6061.g07212.02.t
ATGGGTGACTTCGACGCCAACCCATTTGCCGATCCTTTCAAAGATGGCTCAGTGACACAG
GCGACTTCTGAAGCTGACAAAGCAAATCTGGATGATTTCAATCCCTTTGCAAACAATGAA
AACACAACAATACCTGCTAATTCATCGGCAGTGATGCAGCCTAGCAATCCTCCAGATTAT
GGCACAAATTATGCAGTTTCTGCTCCCCCAGTTGTTGCACCACCTCCCACAGCACCAGTT
CCAGGACATGAAGAATTACTTAGAAGACAAGAGGAGTTGGAAAGGAAAGCGGAAGAATTG
CAACGGAGGGAGCAACAATTGTCATCAGCCAATTACAACCCGAGGGCGAACAACTGGCCT
CCTCTTCCCAAATGGTTTCCGCTACGCCCGTGTTTCTATCAGGATTTCACCGTAGACATC
CCACATGAGTTTCAGAGAACAGTTAAAATGCTTTACTATCTGTGGATGTTCTACGTTGTG
GCGCTGTTTCTGAATGTTCTTTCATCTCTTGCTGCTTACATTGGATGTAAAACACAAAAC
CTAGGTACAGGTTTTGGCTTGTCAATTCTATGGTGGTTGTTATTCACCCCATGTTCTCTA
TGCTGGTATAGACCGGCATACAAAGCTTTCAGAAGTGACAGCTCATTCAATTTCTTCCTC
TTTTTCTTCATGATGTTCTTTCAGTTCTGCTGGTCAGTTCTCATGTGTGTTGGGATTGAA
AACTGGGGATATGCTGGATGGATCCTGGCTATTGCATGTTTTGGAGAAAATCTGGCTGTG
GGAATTATTGTCTGCATCCAAGCAACACTCTTTACTGTCACTGCCGTCTTCTCTCTGCTT
CTACTAAAAAAGACACACTCATTGTATCGTACAACTGGGGCAAGCTTCGAGAAGGCACAG
CAGGAATTTGCAACTGGTGTTATGAAAAATCCTAACGTCCAAAATGCTGCACAGAATGCA
GCCTCAACGGCAGTGCAAAGTAGTCTTAAAGGGCAGTATTGA

InterProScan

PANTHER	SCAMP (IPR007273) - T[2-332] 1.4E-118
Pfam	SCAMP (IPR007273) - T[117-292] 6.5E-66

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SCAM1_HUMAN	54.18 %	305	6.41E-103
SCAM2_HUMAN	47.965 %	280	5.43E-93
SCAM3_HUMAN	46.567 %	261	1.36E-85