Aniseed - Transcript Card

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S6061.g07212.01.t

Possible name(s)

SCAMP1; SCAMP2; SCAMP3

Gene model

Phfumi.CG.MTP2014.S6061.g07212

Location

S6061 [1,543 / 2,970]

Sequences

Amino acid sequence

Length: 338

>Phfumi.CG.MTP2014.S6061.g07212.01.p
LFILTMGDFDANPFADPFKDGSVTQATSEADKANLDDFNPFANNENTTIPANSSAVMQPS
NPPDYGTNYAVSAPPVVAPPPTAPVPGHEELLRRQEELERKAEELQRREQQLSSANYNPR
ANNWPPLPKWFPLRPCFYQDFTVDIPHEFQRTVKMLYYLWMFYVVALFLNVLSSLAAYIG
CKTQNLGTGFGLSILWWLLFTPCSLCWYRPAYKAFRSDSSFNFFLFFFMMFFQFCWSVLM
CVGIENWGYAGWILAIACFGENLAVGIIVCIQATLFTVTAVFSLLLLKKTHSLYRTTGAS
FEKAQQEFATGVMKNPNVQNAAQNAASTAVQSSLKGQY

Nucleotide sequence

Length: 1,017

>Phfumi.CG.MTP2014.S6061.g07212.01.t
CTGTTTATTCTGACAATGGGTGACTTCGACGCCAACCCATTTGCCGATCCTTTCAAAGAT
GGCTCAGTGACACAGGCGACTTCTGAAGCTGACAAAGCAAATCTGGATGATTTCAATCCC
TTTGCAAACAATGAAAACACAACAATACCTGCTAATTCATCGGCAGTGATGCAGCCTAGC
AATCCTCCAGATTATGGCACAAATTATGCAGTTTCTGCTCCCCCAGTTGTTGCACCACCT
CCCACAGCACCAGTTCCAGGACATGAAGAATTACTTAGAAGACAAGAGGAGTTGGAAAGG
AAAGCGGAAGAATTGCAACGGAGGGAGCAACAATTGTCATCAGCCAATTACAACCCGAGG
GCGAACAACTGGCCTCCTCTTCCCAAATGGTTTCCGCTACGCCCGTGTTTCTATCAGGAT
TTCACCGTAGACATCCCACATGAGTTTCAGAGAACAGTTAAAATGCTTTACTATCTGTGG
ATGTTCTACGTTGTGGCGCTGTTTCTGAATGTTCTTTCATCTCTTGCTGCTTACATTGGA
TGTAAAACACAAAACCTAGGTACAGGTTTTGGCTTGTCAATTCTATGGTGGTTGTTATTC
ACCCCATGTTCTCTATGCTGGTATAGACCGGCATACAAAGCTTTCAGAAGTGACAGCTCA
TTCAATTTCTTCCTCTTTTTCTTCATGATGTTCTTTCAGTTCTGCTGGTCAGTTCTCATG
TGTGTTGGGATTGAAAACTGGGGATATGCTGGATGGATCCTGGCTATTGCATGTTTTGGA
GAAAATCTGGCTGTGGGAATTATTGTCTGCATCCAAGCAACACTCTTTACTGTCACTGCC
GTCTTCTCTCTGCTTCTACTAAAAAAGACACACTCATTGTATCGTACAACTGGGGCAAGC
TTCGAGAAGGCACAGCAGGAATTTGCAACTGGTGTTATGAAAAATCCTAACGTCCAAAAT
GCTGCACAGAATGCAGCCTCAACGGCAGTGCAAAGTAGTCTTAAAGGGCAGTATTGA

InterProScan

PANTHER	SCAMP (IPR007273) - T[7-337] 1.3E-118
Pfam	SCAMP (IPR007273) - T[122-297] 6.7E-66

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SCAM1_HUMAN	54.18 %	305	7.17E-103
SCAM2_HUMAN	47.965 %	280	6.45E-93
SCAM3_HUMAN	46.567 %	261	1.41E-85