- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C2.1069.v1...' >
- Transcript 'Phfumi.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S5861.g07133.01.t
Possible name(s)
TBX1; TBX10; TBX18
Gene model
Location
S5861 [5,868 / 9,228]
Amino acid sequence
Length: 223
>Phfumi.CG.MTP2014.S5861.g07133.01.p
YSAQDKLHGYPIDSDASGKAGTGDSFRDTSSTSGHYHSPPPYENQNKGLSQNSADLIKFE
QSLAEMDKQGAAAGELSHAATSSSSPTSSCTRHEPFRKNEKVANVEARLEMRSLWNEFNE
LGTEMIVTKAGRRMFPTFQVKVFGLDLDSEYILLMDFVAVDDKRYRYAFHTSSWSVAGKA
DASMPPRIHVHPDSPAKGGHWMKQIVSFDKLKLTNNLLDDNGH
Nucleotide sequence
Length: 669
>Phfumi.CG.MTP2014.S5861.g07133.01.t
TATAGCGCCCAGGATAAACTGCACGGCTATCCGATAGACAGCGATGCGAGCGGCAAAGCC
GGCACGGGCGACAGTTTTCGCGACACATCTTCCACTAGCGGTCACTATCACTCCCCGCCG
CCGTATGAAAACCAAAACAAGGGGCTTTCCCAAAACAGTGCGGATCTGATCAAGTTTGAA
CAGTCCCTTGCCGAAATGGACAAGCAAGGCGCGGCGGCGGGGGAGTTGAGTCACGCTGCT
ACGTCATCTTCGTCGCCCACGTCATCGTGTACACGTCACGAGCCGTTTCGAAAGAACGAG
AAGGTGGCCAACGTGGAGGCGCGGCTGGAGATGAGGTCACTGTGGAACGAGTTTAACGAA
CTTGGAACGGAGATGATTGTAACAAAGGCGGGAAGACGGATGTTTCCCACTTTCCAAGTG
AAAGTCTTTGGTCTTGACCTCGACAGCGAATATATTCTACTGATGGATTTCGTGGCCGTC
GATGACAAAAGATACAGATACGCCTTTCACACGTCAAGTTGGTCGGTGGCAGGAAAAGCT
GACGCCTCGATGCCTCCTCGAATCCACGTTCACCCTGATTCCCCCGCCAAGGGAGGACAC
TGGATGAAGCAAATCGTTTCTTTCGATAAATTGAAACTTACCAACAATCTTCTCGACGAC
AACGGACAT
| PANTHER |
TF_T-box (IPR001699) - T[67-223] 4.5E-80 |
| Gene3D |
T-box_sf (IPR036960) - T[91-223] 2.7E-54 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[104-223] 9.07E-45 |
| SMART |
TF_T-box (IPR001699) - T[104-223] 2.2E-46 |
| Pfam |
TF_T-box (IPR001699) - T[108-221] 1.1E-42 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[109-223] 45.301 |
| ProSitePatterns |
TF_T-box_CS (IPR018186) - T[114-133] . - T[190-208] . |
| PRINTS |
TF_T-box (IPR001699) - T[122-146] 3.1E-23 - T[189-202] 3.1E-23 - T[206-215] 3.1E-23 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX18_HUMAN | 46.739 % | 178 | 1.52E-52 |
| TBX1_HUMAN | 78.689 % | 214 | 3.87E-68 |
| TBX10_HUMAN | 72.222 % | 210 | 8.93E-67 |