- Transcript 'Phfumi.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S5743.g07086.02.t
Possible name(s)
ABR; SYDE1; SYDE2
Gene model
Location
S5743 [2,017 / 9,769]
Amino acid sequence
Length: 1,139
>Phfumi.CG.MTP2014.S5743.g07086.02.p
MSEVLTNSVEMAPTVNQWELNDTTFKRSQSMPPERRKRRLQQYVPDSTQTRISESSETNE
QGNTNDEIKEIQLRRNKNWYRGMSFRGRKTDVRVSTINPDQLFITNEMKSMLQNGGRPAS
KNGTILHANGVATKPPTPVNRTKHSTSNGLVKMLQGGVRRISSLSEKHGAPTFLTKTVEI
DRSKDGSLGIFIKKRKVPKQFENGAAKQGIFVSRLDTSCKVSRENLLHVGDQILSINNVD
ITDQDVKLVAGMMCLPNNLILKVRSMHKSTSRPKAYQVPKNPQLQRIVEGKSSDISKLAL
PHSNGNAVVAAPSNKTATLNSMYDNDRVDLSNSKPGKDSKPKNSVVRNSVQMRFDESYQI
LLDAIADCEKPKNVNNNCSSEVTRNPSNVDASNLNVQSDLFSSSITQTENIPEDYNSLLN
DILSTIDGHEAPTDELKTYPGNSDIGTFHSNGFENVPTTSESNSAHFHTNIKLIDDPDYD
EVPTTDDESSYSCNEEVNVDAFGDHMKHSPQYNHPEKNPSTSTSSSSLNSQGVDTFSHPT
LMKSHNPDLITRSLSDTGWRSSPDSVLHQQTCCKKASMPRFPVAHTDFTTSECSCMSQQS
SNSINSITVDKKRQWLVTGPQVSDELQMRLDGQHYTTKEGKQKELHSRKVSVTLQKSDDM
KVDTKKRNSCRRRPSESSSSSSGHSSNSPGIPRSQKSSLDSPSSVSDFAFQRKNSIKNST
EKSAKSMLSVSSPSSPSPKSFVYSDKTEPDPERSVPHPKVGGSTIVEKTPQTMKVSQPTL
LYNGSPEEPSNSSTSNRPFAAGKITSPARSRKKNWGKKFTKKFKIGGSSENPMSDYACWI
GEEEQQNAESNLLASHSRVSTQHNLQKIINKSDSAVLNRYHLDISMAHQRRLSRQLEWDN
VLPDPSIKALTLSQFKKYKPVTAINHQFLPAIDGCLVITLYGVRELKKTLCEAYCLVQVD
NATTKRIGTTMQTCRGAVAWNQCFELMVNKARDLHITLYTWETKGGKHKAYSYATLNLPT
LIQGVKLQSNFSERLAVRLEPRGTLYMKVALEQNPSSPGPLVFGADLQSIVDRESTGYSI
PSLVHSCIEEVEKRGMQVVGIYRLCGSAIVKRELRRKVEEAKGVTLLTADNYPDVNVIT
Nucleotide sequence
Length: 3,417
>Phfumi.CG.MTP2014.S5743.g07086.02.t
ATGAGTGAAGTACTCACCAACTCTGTTGAAATGGCACCCACAGTAAATCAATGGGAATTA
AATGACACTACATTCAAAAGGTCACAGTCTATGCCACCTGAACGTCGTAAAAGAAGACTT
CAGCAGTATGTTCCGGATTCTACACAAACTCGAATTTCTGAGTCTTCAGAAACAAATGAG
CAAGGAAATACAAATGATGAAATAAAGGAAATACAGCTTAGAAGGAATAAAAACTGGTAC
AGGGGAATGTCTTTTCGGGGTCGGAAGACCGACGTTCGAGTTAGTACAATCAATCCAGAT
CAGCTATTTATCACAAATGAAATGAAATCAATGCTGCAGAATGGTGGAAGGCCAGCTTCA
AAAAACGGCACAATACTTCATGCAAATGGTGTAGCAACAAAACCCCCAACCCCAGTCAAT
CGAACAAAGCACTCAACAAGCAATGGACTTGTTAAAATGCTGCAAGGAGGCGTTCGACGC
ATTAGCAGTCTATCAGAAAAACATGGCGCCCCAACATTTCTCACTAAAACTGTAGAAATA
GATCGAAGCAAAGATGGAAGTTTAGGCATCTTCATTAAAAAGCGTAAAGTTCCAAAACAG
TTTGAAAATGGTGCTGCAAAACAGGGAATATTTGTAAGTCGCCTTGATACATCATGTAAG
GTTTCAAGAGAGAATCTCCTACATGTGGGCGATCAAATATTGTCAATCAACAATGTTGAC
ATCACAGACCAAGATGTTAAGCTGGTTGCGGGAATGATGTGTTTGCCCAATAATCTTATC
CTGAAAGTTCGATCCATGCATAAGTCTACAAGTCGCCCCAAAGCCTACCAAGTGCCTAAA
AACCCTCAGCTGCAGCGAATTGTGGAAGGAAAATCAAGCGATATCAGCAAACTTGCTTTG
CCACATTCAAACGGAAATGCTGTGGTTGCTGCACCTAGTAACAAAACTGCCACCCTGAAT
AGCATGTATGACAATGATAGAGTGGACTTGTCAAACAGCAAACCTGGAAAAGATAGCAAA
CCCAAAAACAGTGTGGTACGTAATTCGGTGCAAATGAGGTTTGATGAGTCTTATCAAATT
TTGCTGGACGCAATTGCAGATTGCGAGAAGCCAAAAAATGTGAACAACAACTGTAGTAGT
GAAGTTACTCGTAATCCAAGCAATGTGGATGCTTCAAATTTAAATGTTCAGAGTGATTTG
TTTTCGTCAAGCATAACACAGACAGAAAATATTCCTGAGGACTATAATAGTTTGTTAAAT
GACATTCTAAGCACCATAGATGGTCATGAAGCGCCTACTGATGAATTAAAAACATATCCA
GGAAATTCTGACATTGGGACTTTTCACAGTAATGGATTCGAAAATGTCCCAACCACTTCA
GAAAGCAATAGTGCTCATTTTCACACCAACATAAAACTGATAGATGACCCAGATTATGAT
GAAGTTCCCACAACAGATGACGAATCTTCATACAGCTGCAATGAAGAAGTTAATGTTGAT
GCATTCGGTGATCACATGAAACATTCACCCCAATACAATCATCCAGAAAAAAACCCAAGC
ACATCAACTTCATCGTCATCTTTAAACTCACAAGGGGTCGACACGTTTTCACATCCAACG
CTTATGAAGAGTCATAATCCTGATTTAATTACCAGGTCACTCTCAGACACAGGTTGGCGT
TCATCACCAGACAGTGTACTGCACCAGCAAACGTGTTGCAAAAAAGCATCAATGCCACGT
TTTCCCGTCGCTCACACTGACTTTACAACATCGGAATGCAGTTGCATGTCTCAACAGTCC
AGCAATTCCATCAACAGCATTACTGTTGACAAAAAGCGACAGTGGCTAGTAACTGGACCA
CAAGTATCAGATGAGTTACAAATGCGATTAGATGGACAACATTACACAACCAAAGAAGGA
AAACAGAAAGAGTTGCACTCTCGCAAAGTTAGTGTCACATTGCAAAAGAGTGACGATATG
AAAGTTGATACAAAGAAAAGAAACAGCTGCAGGCGTCGACCTTCAGAATCATCAAGTAGC
AGCAGTGGTCATTCCTCCAACTCTCCAGGAATTCCACGCTCCCAAAAAAGTTCTCTTGAC
AGTCCAAGCTCTGTCAGTGATTTTGCATTCCAAAGGAAAAACAGCATAAAAAATTCCACC
GAGAAATCTGCTAAGAGCATGCTGTCAGTCAGTTCTCCATCCTCGCCAAGTCCCAAGTCA
TTTGTCTATAGTGATAAGACCGAACCTGATCCTGAACGCTCAGTACCACACCCCAAAGTA
GGGGGAAGTACAATTGTGGAGAAAACCCCCCAAACAATGAAGGTTTCCCAACCCACTTTG
CTGTACAATGGAAGTCCGGAAGAGCCATCTAATTCAAGTACCAGCAACAGACCATTTGCA
GCGGGAAAAATAACATCGCCAGCACGCTCAAGAAAAAAGAACTGGGGAAAAAAGTTTACG
AAGAAATTTAAAATTGGCGGTAGTTCTGAAAATCCAATGAGCGACTATGCATGCTGGATA
GGGGAAGAAGAACAGCAAAATGCTGAAAGCAATTTATTGGCAAGCCACTCCAGGGTGTCA
ACACAACACAACCTACAGAAGATCATAAATAAAAGCGATTCGGCGGTGCTAAATCGTTAT
CACCTCGATATTAGCATGGCACACCAGAGAAGATTAAGCAGGCAGTTGGAATGGGATAAT
GTTCTGCCAGATCCATCAATCAAGGCCCTCACCCTGTCCCAGTTTAAAAAATACAAACCT
GTAACTGCCATCAACCACCAGTTTCTGCCTGCTATCGATGGCTGTCTTGTAATAACACTG
TACGGTGTACGGGAACTCAAAAAGACGTTGTGTGAGGCCTACTGCCTTGTACAAGTGGAC
AACGCCACAACAAAGCGAATCGGAACTACAATGCAAACTTGTCGTGGAGCTGTAGCATGG
AATCAGTGCTTCGAGCTGATGGTCAACAAGGCAAGGGATTTACACATTACTCTCTACACA
TGGGAAACTAAGGGTGGCAAGCACAAGGCTTACTCGTATGCCACTCTTAATCTTCCAACA
CTAATCCAAGGTGTTAAGCTTCAATCCAATTTCTCCGAGCGCCTGGCTGTGAGACTGGAA
CCGCGTGGCACACTTTACATGAAGGTCGCGCTGGAACAGAATCCATCCAGCCCCGGGCCT
TTAGTTTTCGGTGCTGACCTTCAAAGTATTGTCGATCGCGAAAGTACTGGTTACAGCATT
CCTTCATTAGTGCATTCCTGCATAGAAGAAGTAGAAAAACGCGGGATGCAGGTGGTTGGA
ATATATCGACTGTGCGGTTCCGCAATTGTAAAGAGGGAGCTACGTCGAAAGGTTGAAGAG
GCGAAGGGTGTAACTCTGCTCACCGCTGACAACTACCCCGATGTGAATGTCATAACA
| SUPERFAMILY |
PDZ_sf (IPR036034) - T[172-266] 3.83E-10 |
| ProSiteProfiles |
PDZ (IPR001478) - T[177-243] 12.325 |
| Pfam |
PDZ (IPR001478) - T[178-244] 6.8E-7 |
| SMART |
PDZ (IPR001478) - T[186-267] 3.9E-4 |
| Gene3D |
C2_domain_sf (IPR035892) - T[933-1058] 8.7E-9 |
| SUPERFAMILY |
Rho_GTPase_activation_prot (IPR008936) - T[1060-1136] 4.12E-12 |
| Gene3D |
Rho_GTPase_activation_prot (IPR008936) - T[1061-1139] 1.0E-16 |
| ProSiteProfiles |
RhoGAP_dom (IPR000198) - T[1065-1139] 15.66 |
| Pfam |
RhoGAP_dom (IPR000198) - T[1081-1138] 3.9E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SYDE2_HUMAN | 38.182 % | 157 | 8.91E-39 |
| SYDE1_HUMAN | 32.986 % | 142 | 8.85E-35 |
