- Transcript 'Phfumi.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S5743.g07086.01.t
Possible name(s)
ABR; SYDE1; SYDE2
Gene model
Location
S5743 [0 / 9,739]
Amino acid sequence
Length: 1,104
>Phfumi.CG.MTP2014.S5743.g07086.01.p
MAPTVNQWELNDTTFKRSQSMPPERRKRRLQQYVPDSTQTRISESSETNEQGNTNDEIKE
IQLRRNKNWYRGMSFRGRKTDVRVSTINPDQLFITNEMKSMLQNGGRPASKNGTILHANG
VATKPPTPVNRTKHSTSNGLVKMLQGGVRRISSLSEKHGAPTFLTKTVEIDRSKDGSLGI
FIKKRKVPKQFENGAAKQGIFVSRLDTSCKVSRENLLHVGDQILSINNVDITDQDVKLVA
GMMCLPNNLILKVRSMHKSTSRPKAYQVPKNPQLQRIVEGKSSDISKLALPHSNGNAVVA
APSNKTATLNSMYDNDRVDLSNSKPGKDSKPKNSVVRNSVQMRFDESYQILLDAIADCEK
PKNVNNNCSSEVTRNPSNVDASNLNVQSDLFSSSITQTENIPEDYNSLLNDILSTIDGHE
APTDELKTYPGNSDIGTFHSNGFENVPTTSESNSAHFHTNIKLIDDPDYDEVPTTDDESS
YSCNEEVNVDAFGDHMKHSPQYNHPEKNPSTSTSSSSLNSQGVDTFSHPTLMKSHNPDLI
TRSLSDTGWRSSPDSVLHQQTCCKKASMPRFPVAHTDFTTSECSCMSQQSSNSINSITVD
KKRQWLVTGPQVSDELQMRLDGQHYTTKEGKQKELHSRKVSVTLQKSDDMKKRNSCRRRP
SESSSSSSGHSSNSPGIPRSQKSSLDSPSSVSDFAFQRKNSIKNSTEKSAKSMLSVSSPS
SPSPKSFVYSDKTEPDPERSVPHPKVGGSTIVEKTPQTMKVSQPTLLYNGSPEEPSNSST
SNRPFAAGKITSPARSRKKNWGKKFTKKFKIGGSSENPMSDYACWIGEEEQQNAESNLLA
SHSRAHQRRLSRQLEWDNVLPDPSIKALTLSQFKKYKPVTAINHQFLPAIDGCLVITLYG
VRELKKTLCEAYCLVQVDNATTKRIGTTMQTCRGAVAWNQCFELMVNKARDLHITLYTWE
TKGGKHKAYSYATLNLPTLIQGVKLQSNFSERLAVRLEPRGTLYMKVALEQNPSSPGPLV
FGADLQSIVDRESTGYSIPSLVHSCIEEVEKRGMQVVGIYRLCGSAIVKRELRRKVEEAK
GVTLLTADNYPDENMLKFTRTRFH
Nucleotide sequence
Length: 3,465
>Phfumi.CG.MTP2014.S5743.g07086.01.t
ATGGCACCCACAGTAAATCAATGGGAATTAAATGACACTACATTCAAAAGGTCACAGTCT
ATGCCACCTGAACGTCGTAAAAGAAGACTTCAGCAGTATGTTCCGGATTCTACACAAACT
CGAATTTCTGAGTCTTCAGAAACAAATGAGCAAGGAAATACAAATGATGAAATAAAGGAA
ATACAGCTTAGAAGGAATAAAAACTGGTACAGGGGAATGTCTTTTCGGGGTCGGAAGACC
GACGTTCGAGTTAGTACAATCAATCCAGATCAGCTATTTATCACAAATGAAATGAAATCA
ATGCTGCAGAATGGTGGAAGGCCAGCTTCAAAAAACGGCACAATACTTCATGCAAATGGT
GTAGCAACAAAACCCCCAACCCCAGTCAATCGAACAAAGCACTCAACAAGCAATGGACTT
GTTAAAATGCTGCAAGGAGGCGTTCGACGCATTAGCAGTCTATCAGAAAAACATGGCGCC
CCAACATTTCTCACTAAAACTGTAGAAATAGATCGAAGCAAAGATGGAAGTTTAGGCATC
TTCATTAAAAAGCGTAAAGTTCCAAAACAGTTTGAAAATGGTGCTGCAAAACAGGGAATA
TTTGTAAGTCGCCTTGATACATCATGTAAGGTTTCAAGAGAGAATCTCCTACATGTGGGC
GATCAAATATTGTCAATCAACAATGTTGACATCACAGACCAAGATGTTAAGCTGGTTGCG
GGAATGATGTGTTTGCCCAATAATCTTATCCTGAAAGTTCGATCCATGCATAAGTCTACA
AGTCGCCCCAAAGCCTACCAAGTGCCTAAAAACCCTCAGCTGCAGCGAATTGTGGAAGGA
AAATCAAGCGATATCAGCAAACTTGCTTTGCCACATTCAAACGGAAATGCTGTGGTTGCT
GCACCTAGTAACAAAACTGCCACCCTGAATAGCATGTATGACAATGATAGAGTGGACTTG
TCAAACAGCAAACCTGGAAAAGATAGCAAACCCAAAAACAGTGTGGTACGTAATTCGGTG
CAAATGAGGTTTGATGAGTCTTATCAAATTTTGCTGGACGCAATTGCAGATTGCGAGAAG
CCAAAAAATGTGAACAACAACTGTAGTAGTGAAGTTACTCGTAATCCAAGCAATGTGGAT
GCTTCAAATTTAAATGTTCAGAGTGATTTGTTTTCGTCAAGCATAACACAGACAGAAAAT
ATTCCTGAGGACTATAATAGTTTGTTAAATGACATTCTAAGCACCATAGATGGTCATGAA
GCGCCTACTGATGAATTAAAAACATATCCAGGAAATTCTGACATTGGGACTTTTCACAGT
AATGGATTCGAAAATGTCCCAACCACTTCAGAAAGCAATAGTGCTCATTTTCACACCAAC
ATAAAACTGATAGATGACCCAGATTATGATGAAGTTCCCACAACAGATGACGAATCTTCA
TACAGCTGCAATGAAGAAGTTAATGTTGATGCATTCGGTGATCACATGAAACATTCACCC
CAATACAATCATCCAGAAAAAAACCCAAGCACATCAACTTCATCGTCATCTTTAAACTCA
CAAGGGGTCGACACGTTTTCACATCCAACGCTTATGAAGAGTCATAATCCTGATTTAATT
ACCAGGTCACTCTCAGACACAGGTTGGCGTTCATCACCAGACAGTGTACTGCACCAGCAA
ACGTGTTGCAAAAAAGCATCAATGCCACGTTTTCCCGTCGCTCACACTGACTTTACAACA
TCGGAATGCAGTTGCATGTCTCAACAGTCCAGCAATTCCATCAACAGCATTACTGTTGAC
AAAAAGCGACAGTGGCTAGTAACTGGACCACAAGTATCAGATGAGTTACAAATGCGATTA
GATGGACAACATTACACAACCAAAGAAGGAAAACAGAAAGAGTTGCACTCTCGCAAAGTT
AGTGTCACATTGCAAAAGAGTGACGATATGAAAAAAAGAAACAGCTGCAGGCGTCGACCT
TCAGAATCATCAAGTAGCAGCAGTGGTCATTCCTCCAACTCTCCAGGAATTCCACGCTCC
CAAAAAAGTTCTCTTGACAGTCCAAGCTCTGTCAGTGATTTTGCATTCCAAAGGAAAAAC
AGCATAAAAAATTCCACCGAGAAATCTGCTAAGAGCATGCTGTCAGTCAGTTCTCCATCC
TCGCCAAGTCCCAAGTCATTTGTCTATAGTGATAAGACCGAACCTGATCCTGAACGCTCA
GTACCACACCCCAAAGTAGGGGGAAGTACAATTGTGGAGAAAACCCCCCAAACAATGAAG
GTTTCCCAACCCACTTTGCTGTACAATGGAAGTCCGGAAGAGCCATCTAATTCAAGTACC
AGCAACAGACCATTTGCAGCGGGAAAAATAACATCGCCAGCACGCTCAAGAAAAAAGAAC
TGGGGAAAAAAGTTTACGAAGAAATTTAAAATTGGCGGTAGTTCTGAAAATCCAATGAGC
GACTATGCATGCTGGATAGGGGAAGAAGAACAGCAAAATGCTGAAAGCAATTTATTGGCA
AGCCACTCCAGGGCACACCAGAGAAGATTAAGCAGGCAGTTGGAATGGGATAATGTTCTG
CCAGATCCATCAATCAAGGCCCTCACCCTGTCCCAGTTTAAAAAATACAAACCTGTAACT
GCCATCAACCACCAGTTTCTGCCTGCTATCGATGGCTGTCTTGTAATAACACTGTACGGT
GTACGGGAACTCAAAAAGACGTTGTGTGAGGCCTACTGCCTTGTACAAGTGGACAACGCC
ACAACAAAGCGAATCGGAACTACAATGCAAACTTGTCGTGGAGCTGTAGCATGGAATCAG
TGCTTCGAGCTGATGGTCAACAAGGCAAGGGATTTACACATTACTCTCTACACATGGGAA
ACTAAGGGTGGCAAGCACAAGGCTTACTCGTATGCCACTCTTAATCTTCCAACACTAATC
CAAGGTGTTAAGCTTCAATCCAATTTCTCCGAGCGCCTGGCTGTGAGACTGGAACCGCGT
GGCACACTTTACATGAAGGTCGCGCTGGAACAGAATCCATCCAGCCCCGGGCCTTTAGTT
TTCGGTGCTGACCTTCAAAGTATTGTCGATCGCGAAAGTACTGGTTACAGCATTCCTTCA
TTAGTGCATTCCTGCATAGAAGAAGTAGAAAAACGCGGGATGCAGGTGGTTGGAATATAT
CGACTGTGCGGTTCCGCAATTGTAAAGAGGGAGCTACGTCGAAAGGTTGAAGAGGCGAAG
GGTGTAACTCTGCTCACCGCTGACAACTACCCCGATGAAAACATGTTGAAATTCACACGT
ACAAGGTTTCATTAAACCCCCTTATCACTTTCACTCCCAGGAATTCTCAAGGATTTCTTG
AGAGAACTGCCGCAGCCACTTTTCCCACCAGAACTGCTGGAAGCAGTCACAACCGCTATG
GAGAAAAATCCAGGTCCCACCCCGGCAACAGTTGTCAAGGAACCG
| SUPERFAMILY |
PDZ_sf (IPR036034) - T[162-256] 3.69E-10 |
| ProSiteProfiles |
PDZ (IPR001478) - T[167-233] 12.325 |
| Pfam |
PDZ (IPR001478) - T[168-234] 6.5E-7 |
| SMART |
PDZ (IPR001478) - T[176-257] 3.9E-4 |
| Gene3D |
C2_domain_sf (IPR035892) - T[891-1016] 8.4E-9 |
| SUPERFAMILY |
Rho_GTPase_activation_prot (IPR008936) - T[1018-1083] 1.04E-11 |
| Gene3D |
Rho_GTPase_activation_prot (IPR008936) - T[1019-1099] 1.3E-15 |
| ProSiteProfiles |
RhoGAP_dom (IPR000198) - T[1023-1104] 13.852 |
| Pfam |
RhoGAP_dom (IPR000198) - T[1039-1084] 2.0E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SYDE2_HUMAN | 36.986 % | 150 | 8.36E-37 |
| SYDE1_HUMAN | 35.78 % | 135 | 1.82E-32 |
