- Transcript 'Cisavi.CG.ENS81.R451...' >
- Transcript 'Phfumi.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S5512.g06963.01.t
Possible name(s)
CDC40; WDR25; WDR5
Gene model
Location
S5512 [1 / 3,045]
Amino acid sequence
Length: 383
>Phfumi.CG.MTP2014.S5512.g06963.01.p
GGYVDEVKIAKPSEEMQKELDELTSKRQKRGKKPEEKPVEEKTTLHVKDPLDYQGRSYLH
IPQDVGVNLKSDMPPDKCYLPKKLLHTWTGHTKSVSSIKLFPRSGHLLLSTSMDCKVKLW
EVYNKRRLLRTFTGHGKAVREAAFNNDGSRFLTAAYDRFIKLWDTETGKCISRFSNGKIP
YCVKFNPDHDKQHLFVAGLSDKKIVTWDINSGDTVQEYDRHLGAVNTITFVDNNTKFVST
SDDKSLRVWEWDIPVDFKYIADPGMHSMPACTIAPNGKWLGCQSLDNKIVIFDVQGRFRQ
KRKKVFKGHMVAGYACQLTFSPDMSYVASGDGDGKVCIWDWKTTKMYSKFKAHDSVCIGC
TWHPHETSKLITCGWDGQIKLWD
Nucleotide sequence
Length: 1,152
>Phfumi.CG.MTP2014.S5512.g06963.01.t
GGTGGATATGTGGATGAAGTCAAAATTGCGAAACCATCAGAGGAAATGCAAAAAGAACTG
GATGAACTCACATCAAAGAGGCAAAAGAGAGGAAAGAAGCCCGAAGAAAAGCCGGTTGAA
GAGAAAACCACATTACATGTCAAGGATCCACTTGATTATCAGGGTCGTTCCTATCTGCAT
ATCCCACAAGATGTTGGTGTTAACTTGAAATCTGACATGCCCCCAGACAAATGCTATCTC
CCCAAAAAGCTGCTCCATACATGGACTGGTCACACAAAGTCCGTTTCTTCTATTAAACTT
TTTCCAAGGTCTGGTCATTTACTGTTATCTACATCCATGGATTGTAAAGTCAAGTTGTGG
GAAGTGTACAATAAACGGCGTTTGCTGCGGACATTTACTGGACATGGCAAGGCAGTCCGC
GAGGCCGCGTTTAACAATGACGGAAGCAGGTTTCTCACGGCTGCTTACGACCGATTCATA
AAACTCTGGGACACAGAAACAGGGAAGTGTATTTCGAGGTTTTCAAACGGGAAGATTCCT
TACTGCGTGAAGTTCAACCCAGACCACGACAAGCAACATTTGTTTGTCGCCGGTCTGTCT
GATAAAAAGATCGTAACGTGGGATATCAATTCCGGAGACACGGTGCAAGAGTACGATCGC
CACTTGGGGGCGGTAAACACCATTACTTTTGTCGACAACAACACAAAGTTTGTGTCCACA
TCTGACGACAAGAGTCTCCGCGTATGGGAATGGGACATTCCCGTGGATTTTAAATACATC
GCCGACCCCGGTATGCATTCCATGCCAGCGTGTACGATAGCACCTAACGGGAAGTGGCTT
GGCTGTCAATCACTTGATAACAAGATTGTGATATTCGACGTGCAAGGAAGATTCCGACAG
AAGAGAAAGAAGGTGTTCAAAGGTCACATGGTCGCGGGTTACGCTTGCCAGTTAACATTC
TCCCCAGACATGTCGTACGTGGCTTCGGGGGACGGGGACGGCAAGGTTTGTATATGGGAC
TGGAAGACCACCAAGATGTACAGCAAGTTCAAAGCACATGACAGTGTATGCATCGGCTGT
ACTTGGCATCCTCACGAAACTTCAAAGCTTATAACTTGTGGCTGGGATGGCCAGATTAAG
CTCTGGGATTGA
| PANTHER |
PRPF17 (IPR032847) - T[3-383] 8.6E-219 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[67-383] 1.2E-96 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[79-383] 2.56E-70 |
| SMART |
WD40_repeat (IPR001680) - T[81-121] 1.4E-7 - T[125-164] 4.2E-8 - T[167-208] 0.047 - T[211-250] 2.6E-5 - T[256-293] 150.0 - T[299-340] 1.4E-5 - T[343-383] 4.5E-7 |
| Pfam |
WD40_repeat (IPR001680) - T[83-120] 1.8E-6 - T[127-164] 1.1E-5 - T[213-249] 0.0056 - T[304-340] 4.4E-5 - T[349-383] 0.001 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[88-383] 43.134 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[88-130] 11.611 - T[132-173] 15.254 - T[218-250] 11.879 - T[318-349] 10.308 - T[350-383] 11.21 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[108-122] . |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[108-122] 2.5E-5 - T[151-165] 2.5E-5 - T[370-383] 2.5E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| WDR5_HUMAN | 29.276 % | 132 | 1.35E-35 |
| WDR25_HUMAN | 28.344 % | 149 | 4.17E-40 |
| PRP17_HUMAN | 77.165 % | 648 | 0 |