Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 686

>Phfumi.CG.MTP2014.S5510.g06962.01.p
MAAFENLGVMPEISKVVTETGWNLPTDIQVESIPLILGGGDVLMAAETGSGKTAAFSIPV
IQIVHESYASKGTSAKLQSAGPTFTKWQMNPFDRGSSFAIAPDGLLCQCREFKDWHGCRS
TKGVTSGKYYYEALCKDEGLNRVGWSTSTADLNLGTDKQGYGFGGTGKKSNNRQFDTYGE
PFTMHDTLGCYLDMDAGKIKYSKNGKDLGHAFDIPAHIRKQPMFAACVLKNAEIHFNFGA
EAFKYPPGDGYVALSKAPVNCSVNSSASGGKSVAKQSRKETNAPYAIIIEPSRELAEQTA
NIIKLLKKNISKPELFEVLVVGGVPASDQLRQIDRGVDILIGTPGRIDDFISTKKIDLNQ
VRFLVLDECDGLLTAGNGDFIKRMHARIPQISSDGRRLQVIVCSATLHSFDVKKLAEKIM
HFPIWVDLKGEDSVPDTVHHVVVPVDPVSDPSWMGLRKHVATDGVHKQDYIKKDSREKWS
EGVKILKGEYCIRAIREHKMDQSIIFCRTKLDCDNMEQYFKDLGGGPNNPSHSLSCVCLH
SDRKPPERRSNLERFKKGEVRHLICTDVAARGIDVRGVPFVINVTLPDDKQNYVHRIGRV
GRAERMGLAISLVATKHNEKVWYHSNCNTRGRGCYNTDLTDRGGCCIWYNEGRLLGDIED
HLKITIEQTSAKMEIPVNEFDGKVGS

Nucleotide sequence

Length: 2,058

>Phfumi.CG.MTP2014.S5510.g06962.01.t
ATGGCAGCGTTTGAAAACCTTGGTGTTATGCCTGAGATCAGTAAAGTTGTTACAGAAACG
GGTTGGAATCTTCCCACTGATATCCAGGTTGAGTCCATTCCACTAATCCTGGGCGGTGGA
GATGTTTTAATGGCAGCAGAAACAGGATCTGGTAAAACCGCTGCTTTCAGCATTCCTGTG
ATACAGATTGTTCATGAATCTTATGCAAGCAAAGGAACATCTGCAAAGCTGCAATCTGCA
GGTCCAACATTTACAAAATGGCAGATGAATCCTTTCGATCGAGGTTCATCGTTTGCCATT
GCCCCAGATGGTTTGTTATGTCAATGTCGTGAGTTCAAGGATTGGCACGGTTGTCGCTCC
ACGAAGGGTGTCACATCAGGAAAATATTACTATGAGGCTCTTTGTAAAGATGAGGGGTTG
AACCGTGTTGGCTGGTCGACATCAACTGCTGATTTAAACCTAGGTACGGACAAGCAAGGT
TATGGTTTCGGTGGAACTGGAAAAAAATCAAACAATCGTCAATTCGATACTTATGGGGAG
CCCTTTACCATGCATGATACTTTGGGGTGTTATTTGGACATGGATGCAGGCAAAATCAAA
TACTCAAAAAATGGAAAGGACCTGGGACATGCTTTTGATATTCCCGCACACATAAGGAAG
CAGCCGATGTTTGCTGCATGTGTGCTAAAAAACGCTGAAATCCACTTTAACTTTGGTGCA
GAAGCATTTAAATATCCACCTGGCGATGGTTACGTGGCGCTTTCCAAAGCTCCTGTCAAT
TGTTCAGTGAACAGTTCAGCTTCAGGAGGGAAATCCGTTGCAAAACAGAGCAGAAAGGAG
ACAAATGCTCCATATGCGATCATCATTGAGCCGTCACGGGAGTTAGCTGAGCAAACTGCA
AACATAATCAAATTACTCAAGAAAAATATTTCCAAGCCTGAACTGTTTGAAGTTCTCGTG
GTAGGGGGAGTCCCTGCTTCCGACCAGTTGAGGCAAATTGATCGGGGAGTTGATATTTTG
ATCGGAACACCTGGAAGAATTGATGATTTCATTTCAACGAAAAAGATTGATTTAAATCAG
GTTCGTTTTCTTGTACTGGATGAATGTGATGGGCTGCTCACTGCCGGAAATGGAGATTTC
ATAAAACGAATGCACGCAAGAATTCCACAGATCAGCAGCGATGGAAGACGTTTGCAGGTG
ATTGTCTGTTCTGCTACATTACACAGTTTTGATGTCAAAAAGCTCGCTGAAAAAATCATG
CATTTTCCTATCTGGGTTGATTTGAAGGGTGAGGATTCGGTCCCCGACACTGTCCATCAT
GTTGTGGTCCCAGTTGACCCCGTATCTGACCCCAGTTGGATGGGGCTTCGTAAACATGTG
GCCACCGATGGAGTCCACAAGCAAGATTACATTAAGAAAGATTCCCGGGAGAAATGGTCG
GAAGGAGTCAAGATTTTGAAAGGTGAATATTGCATCCGCGCAATTCGCGAACACAAAATG
GATCAGTCGATTATATTCTGCCGCACAAAACTTGACTGCGACAACATGGAACAATACTTC
AAAGATTTGGGGGGCGGCCCCAACAACCCCAGTCACTCCCTGTCGTGTGTGTGTCTCCAT
AGCGACCGAAAACCCCCCGAGCGCCGAAGCAACCTGGAGCGTTTCAAAAAGGGCGAAGTA
CGTCATCTGATCTGCACTGACGTCGCGGCACGTGGCATTGACGTCAGAGGTGTGCCCTTC
GTCATCAATGTGACGTTACCAGACGATAAACAGAATTACGTGCATAGGATAGGACGAGTG
GGAAGGGCCGAGAGAATGGGACTTGCCATATCACTTGTCGCAACCAAACACAATGAAAAA
GTTTGGTACCACAGCAATTGCAACACTAGAGGGCGCGGTTGTTACAACACGGATTTAACG
GATCGTGGGGGTTGTTGCATTTGGTATAACGAAGGCCGTTTGTTGGGCGATATAGAAGAT
CATCTGAAAATCACGATTGAGCAAACGTCAGCGAAAATGGAAATCCCTGTGAATGAGTTT
GATGGCAAGGTTGGTTCG

InterProScan

ProSiteProfiles	RNA_helicase_DEAD_Q_motif (IPR014014) - T[2-30] 8.602
SUPERFAMILY	P-loop_NTPase (IPR027417) - T[3-67] 7.17E-15 - T[284-621] 8.52E-54
SMART	Helicase_ATP-bd (IPR014001) - T[21-441] 1.1E-45
Pfam	DEAD/DEAH_box_helicase_dom (IPR011545) - T[26-415] 1.9E-62
ProSiteProfiles	Helicase_ATP-bd (IPR014001) - T[33-72] 7.051 - T[252-425] 19.129
ProSiteProfiles	B30.2/SPRY (IPR001870) - T[67-243] 17.696
SUPERFAMILY	ConA-like_dom_sf (IPR013320) - T[83-246] 3.24E-37
SMART	SPRY_dom (IPR003877) - T[126-242] 2.5E-25
Pfam	SPRY_dom (IPR003877) - T[128-239] 2.3E-18
CDD	Helicase_C (IPR001650) - T[483-612] 1.69152E-29
ProSiteProfiles	Helicase_C (IPR001650) - T[487-677] 18.192
Pfam	Helicase_C (IPR001650) - T[489-603] 2.3E-24
SMART	Helicase_C (IPR001650) - T[514-604] 2.4E-24