- Transcript 'Phfumi.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S5345.g06882.02.t
Possible name(s)
BMP10; GDF6; NODAL
Gene model
Location
S5345 [704 / 2,025]
Amino acid sequence
Length: 384
>Phfumi.CG.MTP2014.S5345.g06882.02.p
DSYKQAETWVIVFDLSAILLRERIRLSELNLQVPREYKDVTRVELIDERATSQDGVTALS
RRKIASTHFNARHMPTSQKVSVDVTRLIRRWYNENEKREDKSSSKQQHETVGDFVNERSE
VSDQNPTLFVFSSNKQLDLMETVAAHQTRSRRSSAFRGQRKVHKGRAGKRKNRKLSKKRN
KTDKSRRLYGSADINKVEENVYQYDMVSTNSLEFEAQIGQQKKTDSRKSDQVLMWKKEQK
EVRVVATKKTTDEPKENKKSPAKPNPFGFSFGFRILEPIEPTHCRLVPFEVDFEKIGWGS
WIVHPKKYNANRCVGHCRNPTVHGAKPTNHAYLQSILSNQHDSNVPEPCCVPTKLKPISL
LYLQDGEVQQQQHQDMIVTECGCR
Nucleotide sequence
Length: 1,155
>Phfumi.CG.MTP2014.S5345.g06882.02.t
GATTCCTACAAGCAAGCAGAAACTTGGGTTATCGTGTTTGACCTGTCGGCCATTTTGTTA
CGGGAACGAATTCGCCTTTCCGAGTTGAACCTTCAAGTTCCTCGCGAATACAAAGATGTC
ACCAGAGTGGAGCTGATAGACGAAAGAGCTACTTCACAAGACGGCGTCACTGCACTGTCT
AGAAGAAAAATCGCCAGCACCCACTTTAACGCACGACATATGCCTACCAGTCAAAAAGTT
TCTGTTGACGTCACACGCCTGATTCGTCGCTGGTACAATGAAAATGAAAAGCGGGAAGAC
AAAAGCAGTTCCAAACAACAACACGAAACCGTCGGCGATTTTGTGAACGAAAGAAGCGAG
GTTTCCGACCAAAATCCTACCCTATTCGTTTTTTCAAGCAACAAGCAATTGGATTTGATG
GAAACTGTTGCCGCCCATCAAACCCGAAGCAGACGTTCCTCCGCTTTCCGCGGTCAGCGC
AAAGTGCACAAGGGACGCGCTGGAAAGCGAAAGAACAGAAAGCTCTCCAAAAAGCGCAAC
AAAACTGACAAATCGCGACGATTGTACGGCAGCGCTGACATTAATAAGGTTGAGGAAAAC
GTGTACCAGTACGATATGGTGTCCACAAACAGTCTTGAATTCGAAGCCCAAATCGGACAA
CAGAAGAAAACTGACTCACGCAAATCCGACCAGGTGTTGATGTGGAAAAAGGAACAGAAA
GAAGTGCGGGTCGTTGCTACTAAGAAAACCACCGACGAACCCAAAGAAAACAAGAAGTCT
CCAGCAAAGCCAAATCCATTTGGGTTCAGTTTCGGATTTCGGATTTTGGAGCCAATTGAG
CCAACGCACTGCCGCCTTGTGCCCTTTGAAGTTGATTTCGAAAAGATCGGATGGGGTTCT
TGGATTGTCCACCCAAAAAAGTACAACGCCAACCGATGTGTTGGGCACTGCAGAAACCCG
ACTGTTCACGGAGCAAAGCCAACCAACCACGCATATTTGCAAAGCATTCTTTCCAACCAA
CATGACTCAAATGTGCCTGAGCCATGTTGTGTCCCAACTAAACTGAAACCAATCAGCCTT
CTCTACCTTCAGGACGGAGAAGTTCAACAGCAACAACATCAAGATATGATCGTTACAGAA
TGTGGATGTCGATAA
| PANTHER |
TGF-beta-rel (IPR015615) - T[2-384] 8.9E-65 |
| ProSiteProfiles |
TGF-b_C (IPR001839) - T[256-384] 33.677 |
| Gene3D |
Cystine-knot_cytokine (IPR029034) - T[277-384] 2.3E-35 |
| SUPERFAMILY |
Cystine-knot_cytokine (IPR029034) - T[281-384] 2.06E-34 |
| Pfam |
TGF-b_C (IPR001839) - T[283-383] 1.9E-30 |
| SMART |
TGF-b_C (IPR001839) - T[284-384] 4.4E-49 |
| ProSitePatterns |
TGFb_CS (IPR017948) - T[302-317] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NODAL_HUMAN | 56 % | 131 | 3.91E-35 |
| GDF6_HUMAN | 43.137 % | 103 | 2.42E-24 |
| BMP10_HUMAN | 42.718 % | 106 | 2.28E-25 |