- Transcript 'Harore.CG.MTP2014.S5...' >
- Transcript 'Phmamm.CG.MTP2014.S8...' >
- Transcript 'Boleac.CG.SB_v3.S35....' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'Phfumi.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S52.g00673.01.t
Possible name(s)
FBXW11; FBXW7; TRAF7
Gene model
Location
S52 [5,876 / 9,499]
Amino acid sequence
Length: 629
>Phfumi.CG.MTP2014.S52.g00673.01.p
FTAEGEVEYEHDRTASMSSCRSFSDSREDLRGGSAHGSLPRSLAHSDSLDFFKSRSRGSY
SSSSTLSQPSSYHSNPSEVQALVFVENVSAQLLCKICHKVYKEPIIMSCGHSFCRRCSKS
VEACPVDNKKMSPVLPNLAVSDQVGALYIHCRYGCRLSANHPGEYEVNPSGCPFTVKLSE
RKAHEDSCQYAPISCPNNPTCPIMLRLHLEEHLKLCKNIKCPNHKYGCSFVGDQESQAQH
SANCKYEFVKGFLQVTDEKITKLHSAMKQRDEENNFLRSMLSKTAERVDELEKSFEIKLD
VLSNNQTKLVEELREFRQDTVMINNQLQDLNTRLHMGNIGSFDPQQIFKCKGTFVGHTGP
VWCLCVHGDYLFSGSSDKQIKVWDTATNYKCQKTLEGHEGIVLALTAYGDKLFSGAADCT
IKVWSIDTLEELASISAHENPVCTLVCANNMLFSGSLKSIKVWNVERANIRFHQELQGLN
HWVRALVSHNNFLYSGSYQTIKIWDVLTLECKHVLQTSGGSVYSIAVTNHHIVCGTYENC
IHVWDIRNHEPVAQLTGHVGIVYALAVLSTPEQTKVFSASYDRSLRVWSMENMICTQTLI
RHQGSVVALAVSRGRVFSGGVDFTVKVWQ
Nucleotide sequence
Length: 1,890
>Phfumi.CG.MTP2014.S52.g00673.01.t
TTCACAGCAGAGGGTGAGGTGGAGTATGAACATGACCGAACAGCTTCAATGTCAAGTTGT
AGATCATTCAGTGATAGTCGAGAGGATCTTCGTGGAGGAAGTGCACATGGCAGCCTACCA
AGGAGTCTTGCACACAGTGATTCATTAGATTTTTTTAAAAGCCGTTCACGGGGATCATAT
TCATCATCATCAACTTTGTCACAGCCATCTTCCTACCACTCCAACCCTTCAGAAGTACAG
GCTCTGGTTTTTGTTGAAAATGTGTCAGCTCAACTTTTGTGCAAAATCTGTCACAAAGTC
TACAAGGAGCCAATTATTATGTCATGTGGGCATTCATTTTGTCGACGCTGCTCCAAGTCT
GTTGAAGCTTGTCCCGTTGATAACAAAAAGATGAGCCCTGTTTTACCGAATCTTGCAGTA
AGTGACCAAGTTGGTGCATTGTACATCCACTGTCGATATGGATGCAGATTGAGTGCAAAC
CATCCTGGTGAATATGAAGTAAACCCTTCAGGATGCCCATTCACTGTAAAACTCAGTGAA
AGAAAAGCACATGAAGACTCTTGTCAGTATGCACCTATATCTTGCCCAAACAACCCAACC
TGCCCAATCATGCTGCGTTTACATTTAGAAGAGCACCTAAAGTTGTGCAAAAACATTAAA
TGTCCAAATCACAAATATGGATGTTCATTTGTGGGAGATCAGGAATCGCAAGCACAACAT
TCTGCAAACTGTAAGTATGAGTTTGTCAAAGGCTTTCTTCAGGTAACGGATGAAAAAATC
ACTAAGCTCCATTCTGCCATGAAACAAAGGGATGAGGAAAATAACTTTTTAAGGTCAATG
TTATCAAAAACTGCTGAGAGGGTTGATGAGTTGGAGAAAAGCTTTGAGATTAAACTAGAT
GTGTTGAGTAACAACCAAACAAAGCTGGTTGAAGAATTGCGTGAGTTTCGACAGGACACT
GTTATGATCAATAATCAACTCCAAGACCTAAACACACGACTCCATATGGGAAATATTGGC
TCATTTGATCCCCAGCAAATATTCAAGTGCAAAGGTACATTTGTCGGTCACACTGGTCCT
GTTTGGTGTCTTTGTGTTCATGGTGATTACTTGTTTAGCGGCTCATCAGACAAACAAATC
AAGGTGTGGGATACAGCAACAAACTACAAGTGTCAAAAAACGTTGGAGGGCCATGAAGGC
ATTGTGTTGGCATTGACGGCCTATGGAGACAAGTTGTTTAGTGGGGCAGCAGATTGCACT
ATAAAGGTGTGGTCAATCGACACCCTGGAAGAACTTGCATCTATATCTGCCCATGAAAAT
CCAGTTTGTACACTTGTGTGTGCAAACAACATGCTGTTTAGTGGATCTCTTAAGTCAATT
AAGGTTTGGAACGTTGAAAGAGCAAACATAAGGTTCCACCAAGAACTTCAAGGACTTAAT
CACTGGGTCAGAGCACTTGTCTCACACAACAATTTTCTCTACAGTGGATCATACCAGACT
ATAAAGATATGGGATGTGCTCACATTGGAATGCAAGCATGTACTTCAGACGTCAGGGGGA
AGTGTGTACTCAATTGCTGTTACAAATCATCACATAGTCTGTGGAACCTATGAAAATTGC
ATTCATGTTTGGGACATTCGCAATCATGAGCCGGTCGCCCAGCTTACTGGACATGTCGGC
ATCGTCTACGCCCTTGCCGTTTTGAGCACACCCGAACAAACCAAAGTCTTCAGCGCCTCT
TACGATCGATCCTTGCGGGTTTGGAGCATGGAGAACATGATTTGCACCCAGACGCTTATT
CGTCACCAGGGAAGCGTTGTGGCTTTAGCAGTTTCGCGGGGTCGTGTGTTTTCCGGTGGA
GTTGATTTTACTGTAAAAGTGTGGCAGTGA
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[51-149] 7.9E-11 - T[166-213] 1.0E-7 |
| SMART |
Znf_RING (IPR001841) - T[94-127] 6.3E-6 |
| Pfam |
Znf-RING_LisH (IPR027370) - T[94-118] 1.9E-6 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[94-128] 11.663 |
| SUPERFAMILY |
TRAF-like (IPR008974) - T[146-214] 1.05E-8 - T[206-294] 2.09E-5 |
| ProSiteProfiles |
Znf_TRAF (IPR001293) - T[183-254] 9.913 |
| Pfam |
Znf_TRAF (IPR001293) - T[184-240] 4.7E-6 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[243-470] 2.6E-33 - T[471-629] 4.7E-30 |
| SMART |
WD40_repeat (IPR001680) - T[347-384] 6.0E-10 - T[388-425] 5.7E-5 - T[428-464] 0.15 - T[469-505] 2.1 - T[508-545] 0.034 - T[548-589] 6.0E-4 - T[592-629] 0.0023 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[348-629] 1.37E-65 |
| Pfam |
WD40_repeat (IPR001680) - T[349-384] 7.2E-7 - T[390-425] 1.3E-4 - T[551-589] 0.0054 - T[595-628] 0.13 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[354-393] 11.578 - T[395-434] 11.11 - T[555-598] 9.974 - T[599-629] 10.174 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[354-629] 43.766 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[371-385] . |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[371-385] 5.3E-6 - T[412-426] 5.3E-6 - T[576-590] 5.3E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBXW7_HUMAN | 30.627 % | 123 | 2.88E-29 |
| FBW1B_HUMAN | 27.07 % | 116 | 1.78E-27 |
| TRAF7_HUMAN | 60.635 % | 790 | 0 |