- Transcript 'Phfumi.CG.MTP2014.S5...' >
- Transcript 'KH2012:KH.L70.1.v1.A...' >
- Molecular Tool 'ciad20f14-MO (Hamada's MO)' >
- Transcript 'Phfumi.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S5296.g06852.02.t
Possible name(s)
NOTO; VAX1; VAX2
Gene model
Location
S5296 [5,989 / 7,324]
Amino acid sequence
Length: 370
>Phfumi.CG.MTP2014.S5296.g06852.02.p
GIVNRSRFSEEEEMLPFVPFMKQRTPQMLQKQQDESCTSDEVSDCSSTVSPFSGESDSLV
RSLSTSWSSGSASPGLSCSASSTKPRSSLVGHENVDKHRKAKKRSLFTIDAILADDKPKN
VDYKLKRVSEISNERPAKLPRLAQAIPARSVYDFSNTKPAASPVASQPNEAMQAYFQQYF
QKIATLAYQSPSAAMPTKFAHGLPTPPITPIGNAWFPAVSSAGVSPVFIPSTTPMNLLTP
MTAQAHRASGHISPLSNLQTPENRSNISSDTSNEGKNKRNRTVFTAEQLQCLESEFEKQH
YMVGSERYFLARRLNLNEAQVKVWFQNRRIKWRKQKNQSVGELASPEASAQPDKKTNFQL
LREQAVTATY
Nucleotide sequence
Length: 1,110
>Phfumi.CG.MTP2014.S5296.g06852.02.t
GGTATAGTTAACAGAAGCCGATTTAGCGAAGAAGAAGAGATGTTACCATTTGTGCCATTT
ATGAAACAAAGGACACCACAAATGCTGCAAAAACAGCAGGACGAAAGCTGCACATCAGAT
GAAGTTAGCGATTGCAGTTCTACCGTTTCGCCGTTTTCTGGTGAAAGCGACAGTCTCGTG
CGTTCTCTATCGACGTCGTGGTCATCTGGATCTGCATCACCAGGTCTCTCCTGCTCCGCT
TCATCCACAAAGCCAAGATCAAGTCTCGTGGGACATGAGAACGTGGATAAACATAGGAAA
GCGAAGAAGCGTTCTCTTTTTACAATCGACGCCATTTTGGCTGACGACAAACCCAAAAAT
GTGGATTACAAACTGAAGCGAGTGTCGGAGATTTCAAATGAACGTCCGGCCAAGCTGCCT
CGTCTTGCCCAAGCAATCCCAGCGAGGAGTGTCTATGACTTCTCCAACACCAAGCCAGCA
GCTTCGCCAGTTGCCTCACAGCCAAACGAGGCCATGCAAGCATATTTTCAGCAGTATTTC
CAGAAAATTGCAACACTCGCTTACCAGTCGCCAAGCGCCGCTATGCCCACTAAGTTTGCG
CATGGCCTCCCGACACCACCGATAACTCCAATTGGCAACGCGTGGTTCCCTGCCGTATCT
TCAGCGGGAGTGTCACCTGTGTTTATTCCAAGTACAACTCCCATGAACCTTTTAACTCCA
ATGACAGCTCAAGCACACCGCGCTTCTGGTCACATTTCACCTCTATCCAATCTCCAAACC
CCCGAAAACAGATCCAACATTTCGTCGGACACGAGCAACGAAGGCAAAAACAAACGCAAC
AGAACAGTTTTTACTGCCGAGCAGCTGCAATGCTTGGAAAGCGAATTTGAAAAGCAGCAC
TACATGGTGGGGTCGGAGCGTTATTTCTTGGCACGTCGTCTAAACCTTAATGAAGCTCAG
GTAAAAGTTTGGTTCCAAAATCGACGCATCAAATGGCGCAAGCAGAAAAACCAGTCCGTT
GGTGAACTTGCATCTCCTGAAGCCTCTGCTCAGCCCGACAAGAAAACAAATTTCCAGCTT
TTACGTGAGCAAGCAGTGACTGCAACGTAC
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[270-339] 5.99E-24 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[275-335] 20.682 |
| SMART |
Homeobox_dom (IPR001356) - T[277-339] 4.6E-24 |
| CDD |
Homeobox_dom (IPR001356) - T[278-336] 1.96324E-20 |
| Pfam |
Homeobox_dom (IPR001356) - T[278-334] 4.7E-21 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[310-333] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| VAX1_HUMAN | 62.295 % | 80.5 | 6.13E-17 |
| VAX2_HUMAN | 60.317 % | 80.5 | 4.02E-17 |
| NOTO_HUMAN | 38.4 % | 82 | 7.61E-18 |