- Transcript 'Phfumi.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S5295.g06851.02.t
Possible name(s)
HOXA10; HOXC10; HOXD10
Gene model
Location
S5295 [2,962 / 7,133]
Amino acid sequence
Length: 461
>Phfumi.CG.MTP2014.S5295.g06851.02.p
EHPDTHGQATFGVYDSRLCQTSADKANISAFQNPLKRVGEVAPLGYVDADARSAFSGIPY
QDKKSQVGVESSEKLNPFIMSNLYEAGGPGESYPPHPYRGHQVAAENFLPPIHAVPPSSH
PHVTSAEKYYPEEEMPGTNVHSQQEQQSHLLESQKSREAATPDRNPLIPATSVFRAALDA
DKTPSGPTFPVSSILSDLKTPPVSTQHNGWGVGGGIEEASSDLRKSLSSYPQEEMMKSEK
MDSPFSSEQTSVSPFGTEGKGDVGSTDESDPTKNWLTASGRKKRVPYTKFQLLELEKEFH
YNQYLSRERRLEVAKAVKLTDRQVKIWFQNRRMKWKKERREERMRESVPHEQLAGHMTGG
APPGMYHPGMQAHYSNTAAALAAAAGFSPLNHHPHHPFNSAPAMIPDTMTSHYGYPPPPH
IASASRHHPQAVNQMAAVAAADFLYGGMSRDSTLPLGCMYS
Nucleotide sequence
Length: 1,386
>Phfumi.CG.MTP2014.S5295.g06851.02.t
GAACACCCGGACACTCACGGTCAAGCAACCTTCGGTGTGTATGACAGTCGACTCTGCCAA
ACTTCAGCAGATAAAGCAAACATTTCTGCCTTTCAAAATCCCTTGAAACGAGTCGGCGAG
GTTGCGCCACTTGGCTACGTGGACGCAGACGCGAGATCCGCATTTTCAGGGATCCCTTAC
CAGGATAAGAAGAGTCAAGTTGGAGTTGAATCAAGCGAAAAGCTTAACCCTTTTATAATG
AGCAACTTATACGAGGCTGGGGGACCGGGAGAAAGTTATCCCCCACATCCGTACCGTGGT
CATCAAGTGGCGGCTGAAAATTTCCTCCCACCGATTCATGCGGTGCCCCCCTCCTCCCAC
CCCCATGTGACGTCCGCGGAGAAGTACTACCCCGAAGAAGAGATGCCAGGCACAAACGTA
CACTCCCAGCAAGAACAGCAGAGTCACTTGTTGGAAAGTCAAAAATCCAGGGAAGCGGCA
ACGCCAGATCGAAACCCACTGATACCGGCAACGTCGGTCTTCCGGGCTGCGCTGGATGCT
GACAAGACGCCATCGGGGCCCACTTTTCCAGTTTCATCTATTCTTTCCGACCTCAAAACG
CCCCCGGTTTCGACCCAACATAACGGCTGGGGCGTTGGCGGCGGGATCGAAGAAGCTTCT
TCGGACCTTAGAAAGAGTTTATCTTCGTATCCACAAGAAGAGATGATGAAGTCTGAGAAA
ATGGATTCGCCGTTTTCCAGCGAACAAACCTCTGTGTCCCCGTTCGGAACAGAAGGAAAG
GGTGACGTAGGATCGACTGACGAGAGCGACCCCACAAAGAACTGGCTGACAGCAAGTGGT
CGCAAGAAGCGTGTGCCGTATACGAAGTTTCAGCTCCTCGAACTGGAAAAAGAATTTCAC
TACAACCAGTATTTATCCAGGGAACGAAGATTAGAAGTTGCCAAGGCAGTGAAGCTCACA
GACCGCCAGGTTAAAATCTGGTTCCAGAACCGACGAATGAAGTGGAAGAAAGAGCGACGC
GAGGAGAGGATGAGAGAATCGGTTCCGCACGAACAACTCGCAGGTCACATGACCGGAGGA
GCACCGCCGGGAATGTATCATCCAGGGATGCAGGCTCACTACTCGAACACGGCAGCAGCA
TTGGCCGCAGCCGCCGGTTTTTCACCTCTTAACCATCATCCGCACCATCCGTTTAACTCA
GCCCCAGCTATGATACCAGACACGATGACGTCACACTACGGCTACCCCCCGCCCCCGCAT
ATCGCAAGCGCGTCACGTCATCACCCTCAAGCTGTCAATCAAATGGCGGCGGTGGCGGCG
GCCGATTTCTTGTACGGAGGCATGTCACGTGACAGTACACTGCCCCTGGGTTGCATGTAT
AGTTGA
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[269-340] 1.88E-25 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[278-338] 21.313 |
| SMART |
Homeobox_dom (IPR001356) - T[280-342] 7.8E-26 |
| Pfam |
Homeobox_dom (IPR001356) - T[281-337] 1.2E-20 |
| CDD |
Homeobox_dom (IPR001356) - T[281-337] 1.14254E-25 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[302-313] 2.6E-7 - T[317-327] 2.6E-7 - T[327-336] 2.6E-7 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[313-336] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HXD10_HUMAN | 68.889 % | 127 | 5.74E-33 |
| HXC10_HUMAN | 75 % | 123 | 1.39E-31 |
| HXA10_HUMAN | 51.656 % | 127 | 2.32E-32 |
