- Transcript 'Phfumi.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S5295.g06851.01.t
Possible name(s)
HOXA10; HOXC10; HOXD10
Gene model
Location
S5295 [2,923 / 7,133]
Amino acid sequence
Length: 474
>Phfumi.CG.MTP2014.S5295.g06851.01.p
IETMSTPLLENKVEHPDTHGQATFGVYDSRLCQTSADKANISAFQNPLKRVGEVAPLGYV
DADARSAFSGIPYQDKKSQVGVESSEKLNPFIMSNLYEAGGPGESYPPHPYRGHQVAAEN
FLPPIHAVPPSSHPHVTSAEKYYPEEEMPGTNVHSQQEQQSHLLESQKSREAATPDRNPL
IPATSVFRAALDADKTPSGPTFPVSSILSDLKTPPVSTQHNGWGVGGGIEEASSDLRKSL
SSYPQEEMMKSEKMDSPFSSEQTSVSPFGTEGKGDVGSTDESDPTKNWLTASGRKKRVPY
TKFQLLELEKEFHYNQYLSRERRLEVAKAVKLTDRQVKIWFQNRRMKWKKERREERMRES
VPHEQLAGHMTGGAPPGMYHPGMQAHYSNTAAALAAAAGFSPLNHHPHHPFNSAPAMIPD
TMTSHYGYPPPPHIASASRHHPQAVNQMAAVAAADFLYGGMSRDSTLPLGCMYS
Nucleotide sequence
Length: 1,425
>Phfumi.CG.MTP2014.S5295.g06851.01.t
ATAGAAACAATGAGCACTCCACTGTTAGAAAACAAAGTGGAACACCCGGACACTCACGGT
CAAGCAACCTTCGGTGTGTATGACAGTCGACTCTGCCAAACTTCAGCAGATAAAGCAAAC
ATTTCTGCCTTTCAAAATCCCTTGAAACGAGTCGGCGAGGTTGCGCCACTTGGCTACGTG
GACGCAGACGCGAGATCCGCATTTTCAGGGATCCCTTACCAGGATAAGAAGAGTCAAGTT
GGAGTTGAATCAAGCGAAAAGCTTAACCCTTTTATAATGAGCAACTTATACGAGGCTGGG
GGACCGGGAGAAAGTTATCCCCCACATCCGTACCGTGGTCATCAAGTGGCGGCTGAAAAT
TTCCTCCCACCGATTCATGCGGTGCCCCCCTCCTCCCACCCCCATGTGACGTCCGCGGAG
AAGTACTACCCCGAAGAAGAGATGCCAGGCACAAACGTACACTCCCAGCAAGAACAGCAG
AGTCACTTGTTGGAAAGTCAAAAATCCAGGGAAGCGGCAACGCCAGATCGAAACCCACTG
ATACCGGCAACGTCGGTCTTCCGGGCTGCGCTGGATGCTGACAAGACGCCATCGGGGCCC
ACTTTTCCAGTTTCATCTATTCTTTCCGACCTCAAAACGCCCCCGGTTTCGACCCAACAT
AACGGCTGGGGCGTTGGCGGCGGGATCGAAGAAGCTTCTTCGGACCTTAGAAAGAGTTTA
TCTTCGTATCCACAAGAAGAGATGATGAAGTCTGAGAAAATGGATTCGCCGTTTTCCAGC
GAACAAACCTCTGTGTCCCCGTTCGGAACAGAAGGAAAGGGTGACGTAGGATCGACTGAC
GAGAGCGACCCCACAAAGAACTGGCTGACAGCAAGTGGTCGCAAGAAGCGTGTGCCGTAT
ACGAAGTTTCAGCTCCTCGAACTGGAAAAAGAATTTCACTACAACCAGTATTTATCCAGG
GAACGAAGATTAGAAGTTGCCAAGGCAGTGAAGCTCACAGACCGCCAGGTTAAAATCTGG
TTCCAGAACCGACGAATGAAGTGGAAGAAAGAGCGACGCGAGGAGAGGATGAGAGAATCG
GTTCCGCACGAACAACTCGCAGGTCACATGACCGGAGGAGCACCGCCGGGAATGTATCAT
CCAGGGATGCAGGCTCACTACTCGAACACGGCAGCAGCATTGGCCGCAGCCGCCGGTTTT
TCACCTCTTAACCATCATCCGCACCATCCGTTTAACTCAGCCCCAGCTATGATACCAGAC
ACGATGACGTCACACTACGGCTACCCCCCGCCCCCGCATATCGCAAGCGCGTCACGTCAT
CACCCTCAAGCTGTCAATCAAATGGCGGCGGTGGCGGCGGCCGATTTCTTGTACGGAGGC
ATGTCACGTGACAGTACACTGCCCCTGGGTTGCATGTATAGTTGA
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[282-353] 1.97E-25 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[291-351] 21.313 |
| SMART |
Homeobox_dom (IPR001356) - T[293-355] 7.8E-26 |
| CDD |
Homeobox_dom (IPR001356) - T[294-350] 1.25003E-25 |
| Pfam |
Homeobox_dom (IPR001356) - T[294-350] 1.2E-20 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[315-326] 2.8E-7 - T[330-340] 2.8E-7 - T[340-349] 2.8E-7 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[326-349] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HXD10_HUMAN | 68.889 % | 127 | 7.38E-33 |
| HXC10_HUMAN | 75 % | 123 | 1.93E-31 |
| HXA10_HUMAN | 51.656 % | 127 | 2.9E-32 |
