Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Clone 'AHC0AAA193YA13' > 
  2. Transcript 'Cisavi.CG.ENS81.R19....' > 
  3. Transcript 'Phmamm.CG.MTP2014.S4...' > 
  4. Transcript 'Phmamm.CG.MTP2014.S4...' > 
  5. Transcript 'Phfumi.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S524.g02242.02.t

Possible name(s)

PUF60; U2AF2

Gene model

Phfumi.CG.MTP2014.S524.g02242

Location

S524 [32,861 / 35,042]

Sequences

Amino acid sequence

Length: 423

>Phfumi.CG.MTP2014.S524.g02242.02.p
NGMNYQDAMMPGMGMPAGGYNGEMPYGNLPSSELKQEQPSSKEERHGERSSSGRHRDRKR
SRDRERRKRSRSRDRGRRHRSRSRDKKRRSRSKERSERSKPKRKYRYWDVPPVGYEHVTP
LQYKAMQAAGQIPLVASSQVLGSVGGGAAETTLQVPVAGSQMTRQARRLYVGNIPFGVTE
DAMMEFFNNQMHVAGLSQAPGDPILAVQINLDKNFAFLEFRSVDETSQALAFDGINFMNQ
SLKIRRPSDYKPLPGSADQPAVHLPGVISTVVQDSQHKIFIGGLPNYLGDDQVKELLTSF
GPLRAFNLVKDSATGLSKGYAFAEYVDYLITDQAIAGLNAMQLGEKKLIVQRASVGAKNN
PFGAILAPVTLQIPGMVQATGAGAPTSVLCLMNMVTPEELEDDDEYEDILEDIRDECNKL
GKV

Nucleotide sequence

Length: 1,269

>Phfumi.CG.MTP2014.S524.g02242.02.t
AATGGAATGAATTACCAGGATGCGATGATGCCAGGTATGGGCATGCCTGCTGGTGGTTAC
AATGGAGAAATGCCATATGGAAACTTACCAAGCAGTGAATTGAAACAAGAACAACCTTCC
AGTAAAGAGGAAAGACATGGTGAGCGTAGCAGTTCTGGAAGGCACCGTGACCGAAAGCGG
AGTCGGGATCGTGAAAGAAGAAAGAGAAGCAGAAGTCGTGATAGGGGTCGAAGGCACCGC
TCTCGTAGCAGAGACAAAAAGAGGAGATCTAGAAGCAAGGAGCGTTCAGAACGAAGCAAA
CCAAAGCGGAAGTATCGCTACTGGGATGTTCCTCCTGTTGGCTATGAGCATGTGACACCT
CTCCAATACAAAGCAATGCAGGCTGCTGGACAGATTCCACTGGTTGCATCATCTCAAGTC
TTAGGCAGCGTGGGTGGTGGCGCAGCTGAAACTACACTTCAGGTTCCAGTTGCTGGCAGT
CAAATGACAAGACAAGCAAGGAGACTCTATGTTGGAAACATTCCATTTGGAGTCACAGAA
GATGCAATGATGGAGTTTTTTAACAACCAAATGCATGTTGCTGGACTTTCACAGGCACCT
GGTGATCCTATTTTGGCTGTACAGATTAACTTGGACAAAAACTTTGCATTTCTGGAGTTC
CGTTCTGTGGATGAAACATCACAGGCTCTTGCATTTGATGGCATTAACTTCATGAACCAG
TCATTAAAGATCCGTAGGCCAAGTGACTACAAACCACTTCCAGGCAGTGCAGACCAACCA
GCTGTGCATTTGCCTGGTGTTATTTCCACAGTGGTTCAAGATTCACAACACAAAATTTTC
ATAGGAGGACTTCCAAACTATCTTGGTGACGATCAGGTCAAGGAGTTGCTGACTTCCTTT
GGTCCTTTGAGAGCATTTAATCTTGTTAAGGATAGTGCTACAGGGTTGTCAAAAGGCTAT
GCATTCGCAGAGTATGTTGACTATTTGATAACAGATCAAGCAATAGCAGGTTTAAATGCA
ATGCAGCTTGGAGAAAAGAAACTGATAGTACAGAGAGCTAGTGTTGGGGCAAAGAACAAT
CCATTTGGCGCCATCCTTGCCCCTGTTACATTGCAGATTCCTGGCATGGTCCAAGCTACA
GGTGCAGGAGCCCCAACTTCTGTGTTGTGTCTAATGAACATGGTTACCCCAGAAGAACTT
GAAGATGATGATGAGTATGAAGATATCCTTGAAGATATTAGAGATGAGTGCAACAAGCTT
GGAAAGGTA

InterProScan

TIGRFAM
U2AF_lg (IPR006529) - T[44-423] 2.6E-117
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[166-353] 7.43E-32
Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[167-350] 3.8E-58 - T[253-328] 3.8E-58 - T[382-423] 1.1E-11
ProSiteProfiles
RRM_dom (IPR000504) - T[167-249] 13.464 - T[277-355] 14.522
SMART
RRM_dom (IPR000504) - T[168-245] 3.3E-10 - T[278-351] 1.5E-14
Pfam
RRM_dom (IPR000504) - T[169-242] 6.1E-6 - T[279-348] 2.4E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
U2AF2_HUMAN 69.054 % 459 6.14E-160