- Transcript 'Phmamm.CG.MTP2014.S4...' >
- Transcript 'Phfumi.CG.MTP2014.S5...' >
- Transcript 'Cisavi.CG.ENS81.R19....' >
- Transcript 'Cisavi.CG.ENS81.R97....' >
- Transcript 'Phfumi.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S524.g02242.01.t
Possible name(s)
PUF60; U2AF2
Gene model
Location
S524 [32,855 / 35,039]
Amino acid sequence
Length: 424
>Phfumi.CG.MTP2014.S524.g02242.01.p
MSNGMNYQDAMMPGMGMPAGGYNGEMPYGNLPSSELKQEQPSSKEERHGERSSSGRHRDR
KRSRDRERRKRSRSRDRGRRHRSRSRDKKRRSRSKERSERSKPKRKYRYWDVPPVGYEHV
TPLQYKAMQAAGQIPLVASSQVLGSVGGGAAETTLQVPVAGSQMTRQARRLYVGNIPFGV
TEDAMMEFFNNQMHVAGLSQAPGDPILAVQINLDKNFAFLEFRSVDETSQALAFDGINFM
NQSLKIRRPSDYKPLPGSADQPAVHLPGVISTVVQDSQHKIFIGGLPNYLGDDQVKELLT
SFGPLRAFNLVKDSATGLSKGYAFAEYVDYLITDQAIAGLNAMQLGEKKLIVQRASVGAK
NNPFGAILAPVTLQIPGMVQATGAGAPTSVLCLMNMVTPEELEDDDEYEDILEDIRDECN
KLGK
Nucleotide sequence
Length: 1,272
>Phfumi.CG.MTP2014.S524.g02242.01.t
ATGAGCAATGGAATGAATTACCAGGATGCGATGATGCCAGGTATGGGCATGCCTGCTGGT
GGTTACAATGGAGAAATGCCATATGGAAACTTACCAAGCAGTGAATTGAAACAAGAACAA
CCTTCCAGTAAAGAGGAAAGACATGGTGAGCGTAGCAGTTCTGGAAGGCACCGTGACCGA
AAGCGGAGTCGGGATCGTGAAAGAAGAAAGAGAAGCAGAAGTCGTGATAGGGGTCGAAGG
CACCGCTCTCGTAGCAGAGACAAAAAGAGGAGATCTAGAAGCAAGGAGCGTTCAGAACGA
AGCAAACCAAAGCGGAAGTATCGCTACTGGGATGTTCCTCCTGTTGGCTATGAGCATGTG
ACACCTCTCCAATACAAAGCAATGCAGGCTGCTGGACAGATTCCACTGGTTGCATCATCT
CAAGTCTTAGGCAGCGTGGGTGGTGGCGCAGCTGAAACTACACTTCAGGTTCCAGTTGCT
GGCAGTCAAATGACAAGACAAGCAAGGAGACTCTATGTTGGAAACATTCCATTTGGAGTC
ACAGAAGATGCAATGATGGAGTTTTTTAACAACCAAATGCATGTTGCTGGACTTTCACAG
GCACCTGGTGATCCTATTTTGGCTGTACAGATTAACTTGGACAAAAACTTTGCATTTCTG
GAGTTCCGTTCTGTGGATGAAACATCACAGGCTCTTGCATTTGATGGCATTAACTTCATG
AACCAGTCATTAAAGATCCGTAGGCCAAGTGACTACAAACCACTTCCAGGCAGTGCAGAC
CAACCAGCTGTGCATTTGCCTGGTGTTATTTCCACAGTGGTTCAAGATTCACAACACAAA
ATTTTCATAGGAGGACTTCCAAACTATCTTGGTGACGATCAGGTCAAGGAGTTGCTGACT
TCCTTTGGTCCTTTGAGAGCATTTAATCTTGTTAAGGATAGTGCTACAGGGTTGTCAAAA
GGCTATGCATTCGCAGAGTATGTTGACTATTTGATAACAGATCAAGCAATAGCAGGTTTA
AATGCAATGCAGCTTGGAGAAAAGAAACTGATAGTACAGAGAGCTAGTGTTGGGGCAAAG
AACAATCCATTTGGCGCCATCCTTGCCCCTGTTACATTGCAGATTCCTGGCATGGTCCAA
GCTACAGGTGCAGGAGCCCCAACTTCTGTGTTGTGTCTAATGAACATGGTTACCCCAGAA
GAACTTGAAGATGATGATGAGTATGAAGATATCCTTGAAGATATTAGAGATGAGTGCAAC
AAGCTTGGAAAG
| TIGRFAM |
U2AF_lg (IPR006529) - T[45-423] 2.4E-117 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[168-355] 7.43E-32 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[169-352] 3.9E-58 - T[255-330] 3.9E-58 - T[384-424] 5.3E-11 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[169-251] 13.464 - T[279-357] 14.522 |
| SMART |
RRM_dom (IPR000504) - T[170-247] 3.3E-10 - T[280-353] 1.5E-14 |
| Pfam |
RRM_dom (IPR000504) - T[171-244] 6.1E-6 - T[281-350] 2.4E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| U2AF2_HUMAN | 69.164 % | 458 | 8.83E-160 |