- Clone 'AHC2BAA5YJ05' >
- Transcript 'KH2012:KH.C14.408.v1...' >
- Transcript 'Phfumi.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S5092.g06727.02.t
Possible name(s)
ZIC1; ZIC2; ZIC3
Gene model
Location
S5092 [6,719 / 9,345]
Amino acid sequence
Length: 501
>Phfumi.CG.MTP2014.S5092.g06727.02.p
LPQPYPPFSAISRPNIEPISHLPAGNPTTIFRQAGDASPGSAWPQQPTSNIGIPTQYKYQ
YGDLPLPWQNPAPINFNLPVNFSHNLHTGQSFFTYTAFQHPQAELHQELVCKWTRAMTGC
FDDTGAYQCETKPVHLHVPGEPCNLVFHNMVELVAHVSRDHVGGPEQADHTCYWESCARK
DKPFKAKYKLINHIRVHTGEKPFLCPYPGCGKVFARSENLKIHKRTHTGEKPFCCEFSGC
NRRFANSSDRKKHTHVHTTDKPYLCKIFGCDKSYTHPSSLRKHMKLHEAQGDIGLSSDLD
VQHPTDPQSPDTNNNLPQNINTSLNSYDDEKCCVTPSSQHQHIHVTESPPSSSASSASSP
VSASACENLNLDGGHSTFPYHAINEAGAHEVKCVLEQTNTDSADSGAFQSPQDSWQSPGS
LPSLSSHGLGYFMPSTSSLGSEPQYYYHPSHQPTQHVYSNQLPPYNRQLPPTTATHAPDF
VPFSHNLVTACPQIAPPESVF
Nucleotide sequence
Length: 1,506
>Phfumi.CG.MTP2014.S5092.g06727.02.t
CTTCCCCAGCCCTACCCGCCCTTCTCCGCCATTTCTCGTCCCAACATCGAGCCGATCTCG
CATCTGCCCGCGGGAAATCCGACCACAATTTTTCGCCAAGCCGGCGACGCGTCCCCGGGG
TCAGCTTGGCCCCAGCAGCCAACTTCTAACATCGGTATTCCCACGCAGTACAAGTACCAG
TATGGAGATTTGCCGCTACCTTGGCAGAACCCGGCCCCCATCAACTTCAATTTACCAGTG
AACTTCTCACACAATCTCCACACCGGCCAAAGTTTTTTCACTTACACAGCGTTCCAGCAT
CCTCAGGCGGAACTCCATCAAGAACTTGTTTGTAAATGGACAAGAGCAATGACCGGATGC
TTTGATGATACTGGAGCCTACCAATGCGAAACCAAACCGGTCCATCTCCATGTACCAGGC
GAGCCATGCAATCTAGTATTCCACAATATGGTTGAGTTGGTCGCTCATGTCAGTAGGGAC
CATGTCGGGGGGCCGGAGCAGGCTGACCATACTTGCTACTGGGAAAGCTGTGCCCGAAAG
GACAAACCGTTCAAGGCCAAGTACAAGTTGATCAACCACATTCGTGTCCACACTGGCGAG
AAACCCTTCCTGTGTCCCTACCCTGGGTGCGGAAAAGTATTCGCCCGAAGCGAGAATTTG
AAGATTCACAAACGAACGCATACCGGCGAAAAACCGTTTTGTTGCGAGTTCAGTGGCTGC
AATCGACGATTCGCGAACAGTTCCGATCGGAAGAAACACACACATGTTCACACAACCGAC
AAACCGTATCTCTGCAAGATCTTCGGCTGCGATAAAAGCTACACCCATCCCAGCTCCCTG
CGCAAGCACATGAAGCTGCACGAGGCGCAGGGAGACATTGGTCTCTCCTCCGATCTTGAC
GTGCAGCATCCAACCGACCCGCAGTCCCCAGACACGAACAATAATCTTCCCCAAAACATC
AACACCTCCCTGAATAGCTACGACGACGAAAAGTGCTGTGTCACGCCTTCTAGCCAGCAT
CAGCATATTCACGTCACAGAATCCCCGCCATCGTCATCTGCGTCATCGGCATCATCGCCT
GTGTCGGCAAGTGCTTGTGAAAACCTTAACCTCGATGGTGGACATTCGACGTTTCCATAC
CACGCTATTAATGAGGCCGGTGCGCACGAAGTGAAATGTGTTTTGGAGCAAACCAACACG
GATTCTGCGGACTCCGGGGCCTTCCAAAGCCCGCAGGATTCTTGGCAGAGCCCCGGCAGT
CTTCCGTCTCTGAGCAGCCACGGTTTAGGATATTTTATGCCGAGTACTTCTAGTTTGGGA
AGCGAACCGCAGTATTACTACCACCCTTCACACCAACCAACACAGCACGTTTACAGCAAC
CAGCTCCCACCTTACAACCGACAACTTCCACCCACAACAGCCACCCACGCACCAGATTTT
GTCCCATTTTCGCACAACCTCGTCACCGCGTGCCCCCAAATCGCACCCCCTGAATCAGTT
TTCTAA
| SMART |
Znf_C2H2_type (IPR013087) - T[170-197] 19.0 - T[203-227] 3.4E-4 - T[233-257] 0.49 - T[263-287] 4.3E-4 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[175-202] 11.177 - T[203-232] 16.394 - T[233-262] 12.404 - T[263-292] 11.323 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[184-240] 2.73E-19 - T[248-288] 4.56E-10 |
| Pfam |
Znf_C2H2_type (IPR013087) - T[205-227] 4.9E-5 - T[263-287] 1.1E-4 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[205-227] . - T[235-257] . - T[265-287] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZIC2_HUMAN | 65.829 % | 271 | 5.42E-85 |
| ZIC3_HUMAN | 60.811 % | 276 | 2.3E-87 |
| ZIC1_HUMAN | 56.202 % | 273 | 1.26E-86 |