Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Phfumi.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S4.g00098.02.t

Possible name(s)

VPS26A; VPS26B; VPS26C

Gene model

Phfumi.CG.MTP2014.S4.g00098

Location

S4 [207,805 / 216,323]

Sequences

Amino acid sequence

Length: 627

>Phfumi.CG.MTP2014.S4.g00098.02.p
MNFFGYGAIEDVEIVLDGAEKRKKVEHRISESKSAEMSVYYDGETVSGAVSVGLKQGTKI
DHKGIKIELIGQIEILYDRTNLHDFTTLTKQLASPGVLNQSKVFSFQFPHVEKPFESYFG
SNVRLRYFLKVTVGRRLTDFTKELEFIVHTLSTYPEANNNSIKMEVGIEDCLHIEFEYNK
QKYHLKDAIIGKIYFLLVRVKIKHMEVHIIKRETTGTGPNVYHEDDTIAKFEIMDGAPVK
GESIPIRLFLAGYDLTPSMRDVNKKFSVRYFLNLVLIDEEDRRDKHIANMVRVVATKNSD
IDNDAVVVASSSAVTSPTSVKDNITSNTTVLFTGYTDYASRPMEEVMIVFLIILSAYFTV
VAICYQVKHGQNSVKWTNRLCTICAVLLLLQSCWFVMEVHNRNNVTDATCKVYVAVSLLL
LNVNKSFVYLVLWIRQYTFFKNPRLAQNASKTLFVISYITLAGILILPLCTVAFHLAMKS
YATPVGCVSELGVIASLRWANPITYMLFALCQVVLLGLVLHPIVSHLRRNNGDSSKIQHV
VVRLCTCTAICVITDIGFLVFVSMIPKWASNSFLPIVYSFNAVINTAALYASFTDLVERF
VPCYVRAKISGEANENITPNDTGRTVA

Nucleotide sequence

Length: 1,884

>Phfumi.CG.MTP2014.S4.g00098.02.t
ATGAACTTTTTCGGTTACGGTGCGATTGAAGATGTGGAAATCGTACTTGATGGAGCTGAA
AAGAGGAAAAAAGTTGAGCATCGGATATCTGAGAGCAAGAGTGCAGAGATGAGTGTGTAT
TATGATGGTGAAACTGTTTCTGGTGCTGTTAGTGTAGGGCTCAAACAGGGAACAAAGATT
GACCACAAAGGAATCAAAATCGAATTAATTGGTCAAATAGAAATCCTGTATGACCGAACA
AATCTTCATGATTTCACCACACTCACTAAACAATTGGCAAGTCCAGGAGTACTGAATCAA
AGCAAAGTGTTCTCATTTCAGTTTCCTCATGTTGAAAAACCATTTGAATCCTACTTTGGA
AGTAATGTGAGATTAAGATATTTTTTGAAAGTAACAGTTGGGAGAAGGCTGACAGATTTC
ACAAAGGAACTGGAATTTATTGTTCACACACTGAGCACATACCCTGAAGCGAATAATAAT
AGCATCAAAATGGAAGTGGGAATCGAGGATTGTCTTCATATCGAGTTTGAATACAACAAA
CAAAAATACCACCTCAAAGATGCGATTATTGGAAAAATCTACTTCCTTCTTGTGAGAGTG
AAAATCAAACACATGGAAGTCCACATCATCAAACGCGAAACAACTGGCACTGGACCAAAT
GTCTATCACGAAGACGATACTATTGCAAAGTTTGAAATCATGGATGGTGCACCCGTAAAA
GGTGAATCGATTCCCATCAGGTTGTTCCTGGCTGGCTACGATCTCACTCCATCAATGCGA
GATGTAAACAAGAAATTTTCTGTCCGTTACTTTCTTAACCTTGTACTCATTGATGAAGAA
GACAGGAGAGACAAGCACATTGCAAACATGGTCAGAGTCGTTGCAACCAAAAATAGTGAC
ATTGATAACGACGCTGTTGTTGTGGCGTCGTCGTCAGCTGTAACATCACCGACCAGTGTG
AAAGACAACATAACATCGAATACAACAGTTTTGTTCACTGGATACACAGATTACGCATCA
CGACCAATGGAAGAAGTAATGATTGTCTTTTTGATCATTTTAAGTGCCTACTTTACCGTG
GTGGCAATTTGCTATCAAGTAAAACATGGTCAGAATAGTGTAAAGTGGACCAACAGATTG
TGTACAATCTGTGCCGTATTGCTACTGCTTCAATCCTGCTGGTTTGTAATGGAAGTTCAC
AACAGAAACAATGTTACAGACGCGACTTGTAAAGTATATGTTGCTGTAAGTCTTCTACTG
CTTAATGTTAACAAGTCATTCGTCTACCTGGTGCTTTGGATCCGACAGTACACCTTCTTT
AAGAACCCGCGCTTGGCCCAAAACGCGTCCAAGACCTTGTTTGTGATCAGTTACATTACT
CTGGCCGGAATCCTTATCCTTCCTCTTTGCACAGTTGCGTTCCACCTTGCAATGAAGTCA
TACGCAACTCCAGTTGGCTGCGTGAGCGAATTGGGAGTTATTGCCTCACTTCGCTGGGCC
AACCCAATTACCTACATGCTATTCGCTTTATGTCAGGTTGTACTTCTTGGTCTTGTGCTA
CACCCAATCGTAAGCCATCTACGAAGGAACAACGGCGACAGTTCAAAAATTCAACATGTC
GTTGTGCGCTTATGTACATGCACAGCTATATGTGTCATCACTGATATCGGTTTTCTGGTC
TTCGTTTCAATGATACCAAAGTGGGCTTCCAATTCCTTTCTACCCATTGTGTACAGTTTC
AATGCAGTTATCAACACAGCGGCTTTGTATGCATCGTTTACCGATCTGGTGGAGAGATTT
GTTCCGTGTTATGTAAGAGCAAAAATCAGTGGAGAAGCGAATGAAAATATCACACCGAAT
GATACAGGCCGCACTGTAGCCTGA

InterProScan

PANTHER
Vps26-related (IPR028934) - T[1-289] 3.5E-144
Gene3D
Arrestin_C (IPR014752) - T[1-153] 1.3E-49 - T[154-327] 1.1E-70
Pfam
Vps26-related (IPR028934) - T[9-281] 2.0E-122
SUPERFAMILY
Ig_E-set (IPR014756) - T[36-155] 9.1E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VP26B_HUMAN 70.07 % 427 1.37E-146
VP26A_HUMAN 64.685 % 388 1.63E-131