- Transcript 'Phfumi.CG.MTP2014.S2...' >
- Transcript 'Phfumi.CG.MTP2014.S2...' >
- Transcript 'Phfumi.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S4.g00093.01.t
Possible name(s)
CLCA1; CLCA2; CLCA4
Gene model
Location
S4 [107,546 / 115,111]
Amino acid sequence
Length: 796
>Phfumi.CG.MTP2014.S4.g00093.01.p
VELFCHSDPNDPVNLHNADAPNDQNRLCGDRSVWDVIMGSPDFSAGLNPPNPNLGDATRP
MFRIVKPFPFRRYVLVLDTSGSMTGERILMMRQAVSQFVKLFVEAGDHVGIVSFASFARP
KSQLKPIETDEHRDAMLRHVPSRARGSTCIGCGINAAMSVMDKSSPDACGDIIVFTDGEE
TQAPYVSSVADKVQQKKCRLSAIFLLNPNGNAALQNLVKTTGGEWFASNDENDIRHLIGA
FGKIASNIDGDATKKTSEVHSNSKVVEPGTNLEADVKIDKFIGNNTKFTFTWLTGEAPDV
TLTSPHKCHYTTLAAFGGGKLCGGNPLHEVNEQFKTLTFKIPGTAKIGTWHYSVATSSVQ
TITATVSSKSRNASTPPINVESGTKKDPKKPGCIVLYARVTVGGVPLTSVEVVATITKPD
STEVLVDLFDKGAAPDTKANDGVYTRCFNGANANGRLGMRVEVKSGKETVVGDEESIDST
ATFNPGFIRRNGTVVLNKNGDANRPRPVAEDESTVDSTTVGGFTRVVTSEGFFAEGLELE
PDMDSLPPSSITDLRAKQKNVTDPDAGIQLTFSAPGDDYDSGTAASYIIHYAIDDAITNL
RSSGSGEMISDLELMEGDLGSPQEAGNKEIFHVRTPSVPDTENVVKIGFTVTAIDETGNE
AGPSNVAVLNLYKAPPVIPTLPPIINIPPRPTTPPPTRPPSPTQPTTDTDVRTPVSYLAA
YRTACRYHASSASWEGCRAAKRRLISLRPDYKNVCGDVDYISACKAGYDAACDDTYCHTC
YSPVYKPSYSLYRNGR
Nucleotide sequence
Length: 2,391
>Phfumi.CG.MTP2014.S4.g00093.01.t
GTGGAGCTGTTTTGTCACAGTGACCCAAACGATCCTGTAAATTTGCACAATGCTGATGCC
CCCAATGATCAGAATCGACTTTGTGGTGACAGAAGTGTGTGGGACGTCATAATGGGTTCA
CCAGATTTCTCGGCGGGCCTCAACCCCCCAAACCCAAACCTTGGTGACGCCACAAGGCCC
ATGTTTCGGATTGTTAAACCGTTCCCGTTTCGGAGATACGTTTTGGTTTTGGACACATCC
GGGAGCATGACAGGGGAGCGAATCCTGATGATGCGCCAAGCTGTAAGTCAATTTGTCAAG
TTGTTTGTTGAGGCTGGCGACCATGTGGGCATTGTTTCGTTTGCGTCATTTGCCAGACCC
AAGTCGCAACTCAAGCCGATTGAAACTGATGAGCACCGTGACGCAATGCTACGTCATGTG
CCGAGTCGTGCAAGGGGAAGTACTTGTATTGGATGCGGAATAAACGCAGCGATGTCGGTA
ATGGACAAATCTTCACCTGATGCTTGTGGTGACATTATTGTTTTTACTGATGGAGAAGAG
ACCCAAGCTCCTTATGTGAGCAGTGTGGCTGATAAAGTTCAACAGAAGAAATGTCGACTG
AGTGCAATATTTCTGCTCAACCCCAACGGGAACGCAGCATTACAAAACCTGGTGAAAACA
ACTGGTGGGGAGTGGTTTGCTTCCAACGACGAGAACGATATAAGGCACCTAATTGGTGCA
TTTGGAAAAATAGCTTCCAATATTGATGGAGATGCGACTAAGAAGACATCCGAGGTTCAC
AGTAACTCAAAAGTAGTGGAACCAGGGACAAATCTGGAGGCTGACGTGAAAATCGACAAA
TTCATTGGAAACAACACCAAGTTTACGTTTACCTGGTTAACTGGCGAAGCACCAGATGTT
ACATTGACGTCACCTCATAAATGTCATTATACCACCCTGGCGGCTTTTGGAGGCGGAAAA
CTATGTGGGGGAAACCCCCTACATGAAGTTAATGAGCAATTCAAAACACTGACGTTCAAA
ATTCCTGGGACAGCCAAGATAGGCACCTGGCACTACTCTGTGGCGACATCAAGCGTTCAG
ACCATCACAGCCACAGTTTCCTCCAAATCTCGCAACGCATCAACGCCACCGATTAATGTC
GAAAGCGGTACCAAGAAAGACCCCAAAAAACCTGGCTGCATCGTCTTATACGCACGAGTT
ACTGTTGGAGGGGTGCCGTTGACAAGCGTAGAGGTGGTAGCCACGATTACAAAGCCAGAT
TCGACAGAGGTTTTGGTGGACTTGTTTGATAAAGGCGCAGCACCAGACACAAAAGCAAAT
GACGGAGTTTACACCAGATGTTTCAATGGAGCGAATGCAAATGGACGGTTGGGAATGAGG
GTTGAAGTTAAATCGGGGAAAGAAACAGTGGTGGGTGATGAAGAATCCATCGACTCAACT
GCTACATTCAACCCAGGGTTTATTCGCAGAAATGGCACAGTGGTTCTAAACAAAAACGGT
GACGCAAACCGACCGAGACCTGTTGCAGAAGATGAGAGCACAGTTGACTCGACCACTGTT
GGCGGATTCACGCGAGTAGTAACCAGTGAAGGCTTTTTTGCCGAAGGACTGGAATTAGAA
CCGGACATGGATAGTTTGCCACCAAGCTCCATAACTGATCTACGCGCAAAGCAGAAAAAT
GTCACGGACCCTGACGCAGGAATACAACTCACATTCTCAGCACCAGGAGATGATTACGAC
TCGGGAACCGCTGCTTCGTACATCATTCATTATGCAATTGACGACGCAATTACCAACCTG
AGGTCATCAGGCAGTGGTGAAATGATCAGTGACCTTGAACTGATGGAAGGTGACCTTGGC
AGTCCTCAGGAGGCAGGAAATAAAGAGATCTTTCACGTCAGGACTCCAAGTGTTCCAGAT
ACAGAAAACGTTGTTAAGATCGGGTTCACTGTAACAGCCATAGACGAGACGGGCAACGAA
GCTGGACCTTCAAATGTCGCTGTGTTGAATCTGTACAAAGCTCCACCTGTAATTCCAACG
CTTCCACCAATCATAAACATCCCACCTCGACCCACGACCCCGCCTCCTACACGCCCACCT
AGCCCCACCCAACCAACGACAGACACAGATGTTCGAACTCCAGTTTCATACTTGGCAGCA
TACAGAACAGCTTGCCGCTATCACGCGAGCTCAGCAAGTTGGGAGGGATGCCGTGCAGCC
AAGAGAAGGCTGATTAGTTTGAGACCTGACTACAAGAACGTCTGTGGTGACGTTGATTAC
ATTTCGGCGTGCAAAGCTGGTTACGACGCTGCATGTGATGATACCTACTGTCATACATGC
TATTCACCAGTGTACAAGCCAAGCTACTCTTTGTACAGAAATGGCAGATGA
| Pfam |
CLCA_N (IPR013642) - T[15-44] 1.2E-6 |
| SMART |
VWF_A (IPR002035) - T[70-243] 5.3E-14 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[71-241] 9.1E-26 |
| ProSiteProfiles |
VWF_A (IPR002035) - T[72-241] 14.427 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[72-238] 4.87E-25 |
| Pfam |
VWF_A (IPR002035) - T[74-237] 4.6E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CLCA4_HUMAN | 32.073 % | 264 | 5.01E-76 |
| CLCA1_HUMAN | 31.89 % | 289 | 7.17E-85 |
| CLCA2_HUMAN | 29.088 % | 236 | 7.35E-66 |
