- Transcript 'Phfumi.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S4.g00088.01.t
Possible name(s)
CRIM1; FRAS1; SPON1
Gene model
Location
S4 [61,020 / 69,773]
Amino acid sequence
Length: 398
>Phfumi.CG.MTP2014.S4.g00088.01.p
GIEANFDLDTEDTERRHHQHVRHHRPNDVIVGNFTFPDEVPRQEETNYTQECEQGSLADD
SQVTWHNEDCHTCRCQGATAVCQPETCPSLDCQHPVTVENECCPMCPDQVCKAADGRFFA
EGADWHLDDCTFCECKQGRVLCSIEDCEFKSCKTPHKVPGRCCPVCPDTSCYENNGMNHT
AGTVWKEGVCTHCYCGNGEKLCAEEKCPHINCTNPYQPEGQCCFKCPDAIECVVSTWGDW
GECPIQECGGGMRRRYRSVVIPPRKGGAFCPHMSEAQLCPRTPCNDIPVCPVTDWSPWSH
CTSTCGNGRRMRMRKETKVTKATMTSLIDCSQTHMQESMRCYTGTCNIAPRSLISNEPAN
TNHCQDLAWSAWSKCSSLCGRGNRIRQQIPANTSSKHG
Nucleotide sequence
Length: 1,194
>Phfumi.CG.MTP2014.S4.g00088.01.t
GGCATTGAAGCAAACTTCGACTTGGATACGGAAGACACAGAACGACGTCATCATCAGCAT
GTACGTCATCATCGACCGAATGACGTCATTGTAGGAAATTTTACATTTCCGGATGAAGTT
CCGAGGCAGGAAGAAACCAACTACACGCAAGAGTGTGAACAAGGTTCACTTGCCGATGAC
AGCCAGGTGACATGGCACAACGAAGACTGCCACACATGCCGCTGCCAAGGTGCCACTGCC
GTCTGCCAGCCGGAAACCTGTCCAAGCTTAGACTGCCAACACCCGGTGACGGTCGAAAAC
GAATGCTGCCCGATGTGTCCAGACCAAGTCTGCAAAGCAGCCGATGGTCGCTTTTTCGCT
GAGGGTGCTGATTGGCATTTAGACGACTGTACATTCTGTGAGTGCAAGCAGGGACGTGTA
CTCTGCTCCATCGAAGACTGTGAATTCAAATCCTGCAAAACACCCCACAAAGTTCCCGGC
CGATGTTGTCCGGTTTGTCCTGATACATCTTGTTACGAAAACAACGGGATGAATCACACA
GCTGGAACAGTTTGGAAGGAAGGTGTCTGCACCCACTGCTATTGCGGCAACGGTGAAAAG
CTTTGTGCTGAGGAAAAATGCCCGCATATCAACTGCACGAATCCTTATCAACCTGAAGGC
CAGTGCTGCTTCAAATGTCCAGATGCCATCGAATGTGTAGTCTCTACGTGGGGTGATTGG
GGAGAATGCCCTATACAAGAGTGTGGAGGCGGAATGAGAAGAAGGTACAGAAGTGTGGTG
ATTCCCCCAAGAAAAGGGGGTGCTTTCTGCCCCCACATGAGTGAAGCACAACTTTGTCCG
AGAACGCCATGCAACGATATTCCTGTTTGTCCCGTCACTGACTGGAGTCCGTGGAGTCAC
TGTACCTCGACTTGTGGCAACGGACGTCGTATGCGAATGCGCAAAGAGACCAAGGTCACC
AAAGCCACGATGACGTCACTGATCGACTGCTCGCAAACTCATATGCAGGAAAGCATGAGA
TGTTACACGGGAACGTGTAATATTGCACCGCGCTCATTGATATCGAACGAACCTGCAAAT
ACCAATCATTGTCAAGACTTAGCCTGGTCAGCTTGGAGCAAATGTTCGTCGTTATGCGGC
CGTGGCAACCGAATACGTCAACAGATACCAGCTAATACGTCATCAAAACATGGG
| ProSiteProfiles |
VWF_dom (IPR001007) - T[50-107] 9.825 - T[109-167] 10.572 - T[169-227] 11.045 |
| Pfam |
VWF_dom (IPR001007) - T[52-106] 1.4E-6 - T[114-166] 5.3E-9 - T[174-226] 2.1E-6 |
| SMART |
VWF_dom (IPR001007) - T[52-106] 1.4E-6 - T[111-166] 1.3E-6 - T[171-226] 8.4E-6 |
| ProSitePatterns |
VWF_dom (IPR001007) - T[130-166] . - T[190-226] . |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[229-279] 5.9E-13 - T[288-346] 2.1E-8 - T[350-397] 2.5E-5 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[230-279] 4.58E-9 - T[290-346] 1.96E-7 - T[362-393] 9.68E-6 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[231-285] 10.439 - T[289-347] 9.786 |
| SMART |
TSP1_rpt (IPR000884) - T[234-285] 2.1E-9 - T[292-347] 2.2E-5 |
| Pfam |
TSP1_rpt (IPR000884) - T[235-284] 2.4E-7 - T[294-316] 6.7E-6 - T[369-393] 1.5E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FRAS1_HUMAN | 33.526 % | 82 | 1.15E-16 |
| CRIM1_HUMAN | 33.696 % | 102 | 1.7E-23 |
| SPON1_HUMAN | 31.646 % | 81.3 | 1.91E-16 |
