- EST 'rma141m07' >
- Transcript 'KH2012:KH.C14.172.v1...' >
- Transcript 'Phfumi.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S47.g00635.01.t
Possible name(s)
STOM; STOML1; STOML3
Gene model
Location
S47 [33,864 / 35,037]
Amino acid sequence
Length: 390
>Phfumi.CG.MTP2014.S47.g00635.01.p
MKYTSMNKINKPLDFRSQFTYSGMKEKDDYDDTYEPAYNQEEFSRSSIDCLCASILTGLC
YFICFITFPFSAIFTFKLVNQYERIIVYRLGHLLAPKGPGFVFILPCIDKCNKVDLRTKA
FNVPPTNVRTTDACIISIGAVIHFRIRNPVKMSLSAQNVNHGVRDAAKASMANLLSKQKF
ADVKNKKQVFAYDIQMDVNLTAKDWGVEIGSVELSDITLIMAPPEQQSAFMPMYGAEPLP
SDPTMDTLGHLAKIGQHFIMNNLNQKQQEPVPVPEAPAQLKTAEELFEIVEKSITSQLVK
EVDASFQFEITGDGGGKYYLDLKNSPGIAGRGCNPSGDVDVEVKLDAKTLQTLMSEQMTP
YTAYSSGRLKLQGDLRKAMQLDKVLSHVAI
Nucleotide sequence
Length: 1,173
>Phfumi.CG.MTP2014.S47.g00635.01.t
ATGAAGTACACGTCAATGAACAAGATCAATAAACCTTTAGACTTCAGATCACAGTTTACA
TACAGCGGCATGAAAGAGAAGGATGACTACGATGACACCTATGAACCAGCTTACAATCAG
GAAGAATTCTCAAGGTCGTCTATTGACTGTCTGTGTGCATCGATTCTCACTGGATTATGC
TATTTTATATGTTTTATTACATTTCCATTTTCTGCTATATTTACTTTCAAGCTTGTGAAT
CAGTATGAGAGAATAATTGTGTACAGGCTCGGACATTTGCTTGCTCCCAAAGGTCCTGGT
TTTGTGTTTATTTTGCCCTGTATCGACAAATGCAACAAAGTGGATTTGAGAACCAAAGCA
TTTAATGTTCCACCTACCAATGTGCGCACCACTGACGCTTGCATCATTTCCATTGGGGCT
GTAATTCACTTTCGAATTCGGAACCCTGTGAAGATGAGCTTGTCAGCACAAAATGTAAAT
CATGGTGTAAGAGATGCAGCAAAAGCATCAATGGCAAATCTGTTAAGTAAACAAAAGTTT
GCTGATGTTAAAAACAAAAAACAGGTGTTTGCCTATGACATACAAATGGATGTAAACCTA
ACAGCCAAAGACTGGGGTGTTGAGATTGGCAGTGTCGAGTTGTCAGATATCACATTGATA
ATGGCACCACCAGAGCAACAAAGTGCTTTTATGCCGATGTATGGAGCTGAACCATTGCCT
TCTGATCCAACCATGGACACACTTGGTCATCTTGCGAAAATTGGCCAACACTTCATCATG
AACAATTTAAACCAAAAACAGCAGGAGCCTGTTCCAGTACCTGAGGCTCCCGCACAATTA
AAAACTGCTGAAGAGCTCTTTGAAATTGTTGAAAAGTCTATTACGTCCCAATTGGTTAAG
GAGGTGGATGCCTCATTCCAGTTCGAAATCACAGGTGATGGTGGAGGAAAATATTATTTG
GACCTTAAAAACAGCCCCGGTATCGCTGGAAGAGGTTGCAATCCCAGTGGGGATGTTGAT
GTAGAAGTTAAACTTGATGCCAAGACTCTGCAAACACTTATGTCTGAACAAATGACCCCT
TACACAGCATATTCCAGTGGGCGCCTTAAGCTACAAGGAGACCTACGCAAAGCCATGCAA
TTGGACAAAGTTCTAAGCCATGTGGCAATATGA
| PANTHER |
SLP1 (IPR028517) - T[39-388] 4.1E-96 |
| SMART |
Band_7 (IPR001107) - T[74-234] 3.0E-19 |
| Pfam |
Band_7 (IPR001107) - T[79-219] 5.3E-18 |
| PRINTS |
Stomatin_fam (IPR001972) - T[81-103] 4.5E-15 - T[128-149] 4.5E-15 - T[163-180] 4.5E-15 - T[183-206] 4.5E-15 - T[207-225] 4.5E-15 |
| SUPERFAMILY |
Band_7/SPFH_dom_sf (IPR036013) - T[105-224] 2.09E-19 |
| SUPERFAMILY |
SCP2_sterol-bd_dom_sf (IPR036527) - T[279-386] 1.36E-19 |
| Gene3D |
SCP2_sterol-bd_dom_sf (IPR036527) - T[279-388] 2.6E-23 |
| Pfam |
SCP2_sterol-bd_dom (IPR003033) - T[290-385] 2.0E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| STOM_HUMAN | 32.353 % | 126 | 1.23E-33 |
| STML3_HUMAN | 32.164 % | 120 | 2.99E-31 |
| STML1_HUMAN | 32.682 % | 207 | 4.08E-63 |