- Clone 'cien32803' >
- Clone 'AHC0AAA133YD15' >
- Transcript 'KH2012:KH.L116.59.v1...' >
- Transcript 'Phfumi.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S4760.g06549.01.t
Possible name(s)
SHMT1; SHMT2
Gene model
Location
S4760 [2,109 / 4,419]
Amino acid sequence
Length: 477
>Phfumi.CG.MTP2014.S4760.g06549.01.p
MSSGDFICNGGSDWLEESLKENDPDIYRIIRNEKERQRDGLELIASENFASAAVLQALGS
CLNNKYSEGYPGVRYYGGTENIDELERLCQKRALNLYNLSPEEWGVNVQPYSGSPGNFAV
YTAIVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVNPETGLIDYDQLA
TNARLFKPKMIIAGMSCYPRLLDYEKFRKIASENQAYLMADMAHVSGLVAAGVIASPFKH
CDIVTSTTHKTLRGPRAGIIFYRRGIRFPATQAKSAVMYNLEKPINEAVFPGLQGGPHNH
AIAGVAVALHQAATPQFVEYQKQVIRNAQELARSLVKMGYTIVSGGTDTHLILVNLTSKG
TDGNRADKVLELIGVACNKNTCPGDKSALRPSGLRLGSPALTSRGLNENHFQKVAEFVDR
GVQLTVEIQSSLSPKATFKDFKTKLYGDPGVQQKITEIKNEVNAFARGFKIPGLRYL
Nucleotide sequence
Length: 1,434
>Phfumi.CG.MTP2014.S4760.g06549.01.t
ATGTCTTCTGGTGATTTTATTTGCAACGGCGGCTCGGACTGGCTGGAGGAATCGCTCAAA
GAAAATGACCCAGATATTTACAGGATCATTCGAAACGAAAAAGAGCGACAGAGAGATGGA
CTGGAACTGATCGCATCAGAAAATTTTGCGAGCGCCGCCGTCTTGCAAGCTCTTGGGTCA
TGTTTAAACAACAAGTATTCGGAGGGATACCCGGGTGTGAGATATTACGGTGGCACTGAA
AATATTGATGAATTAGAAAGGCTGTGTCAAAAACGAGCACTAAATCTGTACAATTTGTCA
CCAGAAGAATGGGGAGTAAATGTGCAGCCATATTCTGGTTCACCTGGCAATTTTGCAGTT
TATACTGCAATTGTTGAGCCCCATGGACGCATCATGGGATTGGATTTACCAGATGGAGGA
CATTTGACCCATGGTTTTATGACAGAAAAAAAGAAAATATCTGCAACTTCTATCTTTTTT
GAATCCATGCCATATAAGGTTAACCCAGAAACAGGTTTGATAGATTATGACCAACTTGCA
ACCAATGCCAGATTGTTTAAACCGAAAATGATAATAGCAGGAATGAGCTGTTACCCTCGT
CTCCTGGACTATGAAAAATTTAGAAAGATTGCTTCAGAAAATCAAGCTTACTTAATGGCA
GACATGGCTCATGTTAGTGGGCTGGTGGCTGCTGGGGTTATTGCTTCACCATTTAAACAC
TGTGACATTGTGACAAGCACCACTCATAAAACACTAAGAGGTCCACGTGCAGGGATTATA
TTCTATCGACGTGGTATTAGATTTCCAGCAACCCAAGCAAAGTCTGCTGTCATGTACAAC
CTGGAAAAGCCAATAAACGAAGCAGTGTTTCCTGGGCTACAGGGTGGACCACATAATCAT
GCAATAGCTGGTGTTGCTGTAGCTTTACATCAAGCAGCAACTCCACAGTTTGTTGAATAT
CAAAAGCAGGTAATTAGAAATGCACAGGAGCTTGCAAGATCTCTCGTCAAAATGGGTTAT
ACCATTGTTTCTGGTGGCACTGATACTCATCTTATTCTTGTAAATCTAACGAGCAAGGGG
ACAGATGGAAATCGTGCTGACAAAGTTCTTGAGTTAATTGGTGTTGCTTGCAACAAAAAC
ACATGCCCTGGTGACAAGTCAGCTTTGCGGCCAAGTGGTTTAAGACTAGGATCGCCAGCA
CTGACCTCAAGAGGTTTAAATGAAAATCATTTCCAAAAAGTTGCTGAGTTTGTTGACAGG
GGTGTTCAGCTGACAGTTGAAATACAATCTTCCCTGTCACCCAAAGCAACTTTCAAGGAT
TTCAAGACAAAATTGTATGGTGATCCTGGCGTGCAACAAAAAATAACGGAAATAAAAAAT
GAGGTTAATGCTTTTGCTAGGGGTTTCAAAATACCCGGCTTGCGTTACTTGTAA
| PIRSF |
Ser_HO-MeTrfase (IPR001085) - T[8-476] 8.9E-173 |
| SUPERFAMILY |
PyrdxlP-dep_Trfase (IPR015424) - T[14-473] 6.72E-180 |
| PANTHER |
Ser_HO-MeTrfase (IPR001085) - T[16-474] 3.2E-232 |
| Hamap |
Ser_HO-MeTrfase (IPR001085) - T[18-473] 43.016 |
| CDD |
Ser_HO-MeTrfase (IPR001085) - T[20-441] 0.0 |
| Gene3D |
PyrdxlP-dep_Trfase_dom1 (IPR015422) - T[23-472] 3.3E-211 |
| Gene3D |
PyrdxlP-dep_Trfase_major (IPR015421) - T[48-322] 3.3E-211 |
| ProSitePatterns |
Ser_HO-MeTrfase_PLP_BS (IPR019798) - T[242-258] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GLYC_HUMAN | 69.783 % | 654 | 0 |
| GLYM_HUMAN | 60.784 % | 610 | 0 |