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  1. Transcript 'KH2012:KH.C14.337.v1...'
  2. Transcript 'KH2012:KH.C14.337.v1...'
  3. Transcript 'Phfumi.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S4677.g06509.01.t

Possible name(s)

ATAD5; CHTF18; RFC1

Location

S4677 [5,603 / 10,860]

Sequences

Amino acid sequence

Length: 517

>Phfumi.CG.MTP2014.S4677.g06509.01.p
MADDGFDEYAYYESQYADELDALNELEGVGQPEKTSNAEIPEPEITDIPELDTDSISNKR
RKLFSPAKDGFDSDLVIDEEVVPLSPMRKRPRMEQHKPSMPTTLDVDRDVEMQRQKELRD
KNCLSTPQMIEKILRHRESKHSAPEFVPTETTAQKTFQLTKVLVHPPVHSDFISATASDG
QRVYMRMRSNDKLTSVLNSNELITGSRSLQLLPQSLPELRQSIYEKKQQERLLETQRITE
EVRRDALGLGDNTLMNQVLSESTMTMDSENQEDEGIYSGEENSQDGLWVNKFAPTHYTHL
LSDEGVNRSLLKWLKLWDHVVFGRPVQPKKNQDKENQPKQQQHKFKGKFGKFKTNEQEEE
LDEFNRPHFKISLLCGAPGLGKTTLAHIIARHAGYHVVEMNASDDRSAEAFKKKLEETTQ
MKSVLGTDQRPNCLIIDEIDGAPQAAINVLLNSISQTKKQEPKKKKKKETKNFLQRPIIC
ICNDLYVPSLRQLRQQSYLLQFPPTTTDRLASRLRQV

Nucleotide sequence

Length: 1,551

>Phfumi.CG.MTP2014.S4677.g06509.01.t
ATGGCTGATGATGGATTTGACGAATACGCCTATTACGAGTCACAGTACGCTGATGAACTT
GATGCACTGAATGAACTTGAAGGAGTTGGTCAGCCTGAAAAAACAAGCAATGCAGAGATT
CCTGAACCTGAAATTACCGACATTCCGGAGCTTGATACAGATTCTATAAGCAACAAGCGG
AGAAAGCTGTTTTCTCCTGCTAAAGATGGTTTTGATTCTGACCTGGTAATTGATGAGGAG
GTCGTCCCATTGTCCCCCATGAGGAAACGACCACGTATGGAACAACATAAACCTAGCATG
CCAACTACACTCGATGTTGACAGGGATGTGGAGATGCAAAGACAAAAGGAGCTGAGAGAC
AAGAATTGCCTCAGCACGCCGCAGATGATAGAAAAAATTTTACGACATCGGGAAAGCAAA
CACAGCGCTCCAGAATTTGTTCCCACTGAAACAACAGCACAGAAGACCTTTCAGCTAACC
AAAGTGCTTGTCCACCCTCCTGTCCATAGTGACTTCATTTCGGCCACAGCATCCGATGGA
CAAAGAGTCTACATGCGCATGAGATCAAATGACAAACTTACCTCGGTTTTAAACTCCAAC
GAACTGATCACCGGTTCAAGATCTTTGCAGTTGTTGCCACAATCTCTACCTGAACTGAGA
CAAAGCATTTATGAAAAGAAACAACAGGAAAGGCTCCTGGAAACTCAACGGATCACAGAA
GAAGTAAGAAGAGACGCTCTCGGTCTTGGTGACAACACTTTGATGAATCAGGTCTTGTCG
GAGAGCACAATGACAATGGATTCGGAGAACCAGGAAGACGAGGGGATTTACAGTGGGGAG
GAGAACTCTCAGGATGGGTTATGGGTGAACAAATTTGCCCCAACTCACTACACTCATTTG
TTAAGTGATGAGGGTGTGAATCGTTCTTTGTTGAAATGGCTCAAACTGTGGGATCATGTC
GTATTTGGTCGGCCGGTCCAACCAAAGAAAAACCAGGACAAGGAAAACCAACCTAAGCAA
CAGCAGCACAAGTTTAAGGGAAAGTTCGGGAAATTTAAAACAAATGAACAAGAAGAGGAA
TTGGACGAGTTTAATCGACCTCACTTCAAGATCTCCTTACTGTGTGGAGCGCCTGGACTC
GGCAAAACTACCCTGGCCCACATTATTGCGAGGCATGCTGGGTATCATGTTGTTGAAATG
AATGCAAGTGATGACCGAAGTGCCGAAGCGTTCAAGAAAAAACTTGAAGAAACAACTCAA
ATGAAGTCTGTTCTCGGAACAGACCAACGACCAAATTGTTTGATTATTGATGAAATAGAT
GGCGCTCCTCAGGCTGCAATTAATGTTTTACTAAATTCGATCTCCCAAACCAAGAAGCAA
GAACCAAAAAAGAAAAAGAAGAAAGAAACAAAAAACTTCCTGCAAAGACCCATCATTTGC
ATTTGCAATGATTTATATGTTCCATCGTTGAGGCAACTGAGACAACAAAGTTATCTTCTC
CAATTCCCGCCGACCACCACAGACAGACTTGCATCCAGACTTCGACAAGTG

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[281-486] 6.23E-24
SMART
AAA+_ATPase (IPR003593) - T[368-503] 8.9E-9
Pfam
ATPase_AAA_core (IPR003959) - T[373-483] 1.9E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CTF18_HUMAN 35.217 % 263 7.42E-78
RFC1_HUMAN 29.502 % 103 2.87E-23