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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C1.795.v1....'
  2. Transcript 'Phfumi.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S4616.g06467.01.t

Possible name(s)

ATG4B; ATG4C; ATG4D

Location

S4616 [6,646 / 9,315]

Sequences

Amino acid sequence

Length: 334

>Phfumi.CG.MTP2014.S4616.g06467.01.p
MSIKAAVDGFISDMKSMSFGSQTNDRSPNSSRQSDESDTMKAKFLEAWNNFKFDMGSGTS
VKKDLPLWLLGNCYHFHLPIESSAYGSPGQDDKFSKDYDHFQSFLKDFASKPWFTYRKGF
PPLEDGGLTSDTGWGCMLRTAQMMMAQCFITHFLGRNWRWLSKERKTEKRVLKECEIHRT
IIKWFVDDPSSKCPFSIHRLTEIGLGYRFSPGDWYGPGTVAYIMQDATECAKGLNPLLNE
LVVYVAQDCTVYSQDVIQVCHWDKHDKYGTTNPPNNTTNGHSSTSPVDIDITADDPPKRS
VIILIPVRLGEACLNPIYSPCLKGMLALDQCMGI

Nucleotide sequence

Length: 1,002

>Phfumi.CG.MTP2014.S4616.g06467.01.t
ATGTCTATTAAAGCGGCTGTGGATGGGTTTATTAGCGATATGAAGTCTATGTCGTTTGGC
TCACAGACAAATGACAGATCGCCAAACAGCTCAAGGCAATCGGATGAAAGTGACACCATG
AAAGCCAAGTTTTTGGAAGCATGGAATAACTTTAAATTTGACATGGGCTCTGGAACAAGC
GTAAAAAAGGACTTGCCCCTTTGGTTACTTGGAAACTGCTATCATTTTCATCTTCCAATA
GAAAGTTCTGCTTATGGTTCTCCAGGACAAGATGACAAGTTTTCCAAAGACTACGATCAC
TTTCAAAGTTTTTTGAAAGATTTTGCATCCAAGCCTTGGTTTACATATCGCAAAGGATTC
CCTCCACTGGAAGATGGAGGTCTAACTTCTGACACTGGGTGGGGATGCATGTTAAGAACT
GCACAAATGATGATGGCACAGTGTTTTATAACACATTTTTTAGGTCGTAACTGGAGATGG
CTTTCAAAAGAGAGAAAAACAGAAAAGAGAGTGTTAAAAGAATGTGAAATTCACAGAACA
ATTATAAAGTGGTTTGTAGATGACCCAAGCTCTAAATGTCCATTTAGCATTCACAGACTG
ACTGAAATCGGTCTAGGCTATCGTTTTTCTCCTGGTGATTGGTATGGGCCTGGAACAGTG
GCCTACATTATGCAGGATGCCACTGAGTGTGCCAAGGGCCTAAATCCCCTGTTAAATGAA
CTTGTGGTATATGTTGCTCAAGATTGCACAGTTTACTCTCAGGATGTTATTCAAGTCTGC
CACTGGGACAAACATGACAAATATGGCACCACAAACCCTCCCAACAATACTACAAATGGC
CATTCTTCAACTTCACCAGTGGACATTGATATAACTGCTGATGACCCTCCCAAACGATCA
GTGATTATTTTAATTCCCGTCAGATTAGGCGAGGCTTGTTTGAATCCAATTTACAGCCCA
TGTTTAAAAGGCATGTTGGCTTTGGATCAGTGCATGGGGATT

InterProScan

PANTHER
Peptidase_C54 (IPR005078) - T[13-334] 4.4E-86
Pfam
Peptidase_C54 (IPR005078) - T[102-334] 4.6E-64

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ATG4B_HUMAN 33.766 % 142 4.57E-39
ATG4D_HUMAN 37.273 % 196 7.68E-59
ATG4C_HUMAN 37.006 % 197 2.14E-59