- Region 'REG00001199' >
- Transcript 'KH2012:KH.L170.59.v1...' >
- Transcript 'KH2012:KH.S404.1.v1....' >
- Transcript 'Phfumi.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S4428.g06354.01.t
Possible name(s)
HDAC1; HDAC2; HDAC3
Gene model
Location
S4428 [2,450 / 10,051]
Amino acid sequence
Length: 300
>Phfumi.CG.MTP2014.S4428.g06354.01.p
ILMYLAGAVKINKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLSILELLKYHQRVLYI
DIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYALNFPLRDGMD
DECYEQIFQPVITKVMEYYQPSAVVLQCGADSLTGDRLGCFNLTVKGHAKCLEYVKKFNI
PVLMLGGGGYTIRNVARCWTYETAVALGQEIPNELPYNDYFEYFGPDFKLHISPSNMSNQ
NTTEYLHKIRQRLFENLRMLPHAPGVQMAEIPPDAVAEESEDEAMEDPDKRTSSKILVLL
Nucleotide sequence
Length: 900
>Phfumi.CG.MTP2014.S4428.g06354.01.t
ATTTTAATGTATCTAGCTGGTGCAGTGAAAATAAACAAGCAACAGACTGACATTGCAATC
AACTGGGCTGGAGGTCTCCATCATGCCAAGAAGTCTGAGGCATCCGGTTTCTGCTATGTT
AATGATATTGTCCTCTCCATTCTGGAGCTGCTCAAATATCACCAGCGTGTTCTGTACATT
GACATAGACATCCACCACGGTGACGGAGTGGAGGAAGCCTTTTATACCACCGACCGAGTC
ATGACCGTCTCCTTCCACAAATATGGAGAATACTTTCCTGGCACTGGTGATCTTCGTGAT
ATCGGAGCCGGCAAGGGAAAGTATTATGCACTGAACTTTCCCCTTCGAGATGGAATGGAC
GACGAATGTTATGAGCAAATCTTCCAACCTGTTATCACTAAGGTGATGGAATATTACCAG
CCCAGCGCAGTTGTGCTACAGTGTGGCGCAGACTCGCTTACTGGGGACAGATTAGGATGC
TTCAACCTCACTGTTAAAGGGCATGCCAAATGTCTAGAGTACGTTAAGAAATTCAACATT
CCCGTTCTGATGCTGGGAGGTGGAGGTTATACTATTCGAAACGTTGCACGATGTTGGACA
TACGAAACTGCAGTGGCTCTGGGTCAAGAAATACCAAATGAGTTGCCGTACAACGATTAC
TTTGAATACTTCGGTCCTGATTTCAAGCTTCACATCAGTCCAAGCAACATGTCCAACCAG
AACACGACAGAATATTTGCACAAGATTCGACAGCGCTTGTTCGAAAATCTCCGTATGCTC
CCACACGCACCTGGAGTCCAAATGGCTGAAATTCCTCCGGATGCAGTGGCTGAGGAAAGT
GAAGATGAAGCGATGGAAGATCCAGACAAACGAACATCAAGTAAGATTCTCGTTTTACTA
| PRINTS |
His_deacetylse_1 (IPR003084) - T[2-22] 3.9E-32 - T[43-59] 3.9E-32 - T[102-115] 3.9E-32 - T[119-137] 3.9E-32 |
| Gene3D |
His_deacetylse_dom_sf (IPR037138) - T[2-262] 8.6E-123 |
| PIRSF |
His_deacetylse_1 (IPR003084) - T[3-297] 2.0E-164 |
| SUPERFAMILY |
Ureohydrolase_dom_sf (IPR023696) - T[5-260] 1.63E-98 |
| PANTHER |
His_deacetylse (IPR000286) - T[5-294] 1.5E-178 |
| Pfam |
His_deacetylse_dom (IPR023801) - T[5-204] 1.6E-67 |
| PRINTS |
His_deacetylse (IPR000286) - T[24-47] 1.1E-24 - T[56-71] 1.1E-24 - T[141-151] 1.1E-24 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HDAC1_HUMAN | 86.505 % | 524 | 0 |
| HDAC2_HUMAN | 87.197 % | 520 | 0 |
| HDAC3_HUMAN | 67.021 % | 412 | 1.72E-144 |