- Transcript 'Phfumi.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S433.g02041.01.t
Possible name(s)
CALM1; TNNC1; TNNC2
Gene model
Location
S433 [8,692 / 10,461]
Amino acid sequence
Length: 162
>Phfumi.CG.MTP2014.S433.g02041.01.p
SMTVEDARASLTKDQISEFKQAFDIFDEDGGGDISTSELGRVMKMLGQTPNREELAKIVE
EVDVDGSGTIDFDEFLIMMVMQIAEEGKTASEEELKDLFRLLDKDGDNYIDWDELREALE
GVTVDPPIETWEIDELLKEADKNGDGVIDVEEWGIWMDGVQA
Nucleotide sequence
Length: 486
>Phfumi.CG.MTP2014.S433.g02041.01.t
TCTATGACAGTTGAAGACGCCCGTGCCTCTCTTACGAAGGATCAAATATCAGAGTTCAAG
CAGGCGTTTGACATCTTTGATGAAGATGGCGGTGGCGACATCAGTACGAGTGAACTGGGC
CGCGTCATGAAAATGTTGGGACAAACCCCAAACCGAGAAGAACTCGCAAAGATCGTTGAA
GAAGTTGACGTTGACGGCAGTGGAACAATCGATTTCGATGAGTTTCTTATCATGATGGTC
ATGCAGATTGCCGAGGAGGGAAAGACGGCAAGCGAAGAGGAATTAAAAGACCTCTTTCGA
CTGCTTGACAAAGACGGCGATAACTATATTGATTGGGACGAGCTTCGCGAAGCATTGGAA
GGTGTGACCGTCGATCCTCCTATTGAAACTTGGGAAATTGACGAACTTTTAAAGGAGGCG
GACAAGAACGGCGACGGAGTGATTGACGTCGAAGAATGGGGAATTTGGATGGATGGCGTA
CAAGCA
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[10-159] 3.87E-41 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[14-49] 13.37 - T[50-85] 13.704 - T[90-125] 16.466 - T[132-162] 9.185 |
| SMART |
EF_hand_dom (IPR002048) - T[18-46] 1.2E-4 - T[54-82] 9.9E-5 - T[94-122] 1.9E-4 - T[132-160] 2.3E-4 |
| Pfam |
EF_hand_dom (IPR002048) - T[18-79] 2.4E-11 - T[92-152] 3.6E-13 |
| CDD |
EF_hand_dom (IPR002048) - T[18-79] 4.16763E-17 - T[94-153] 2.24902E-13 |
| ProSitePatterns |
EF_Hand_1_Ca_BS (IPR018247) - T[27-39] . - T[63-75] . - T[103-115] . - T[141-153] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CALM1_HUMAN | 48.252 % | 134 | 7.72E-41 |
| TNNC1_HUMAN | 53.165 % | 146 | 1.88E-45 |
| TNNC2_HUMAN | 55.128 % | 164 | 7.42E-53 |