- Transcript 'Phfumi.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S418.g01993.02.t
Possible name(s)
DDX27; DDX47; DDX54
Gene model
Location
S418 [26,787 / 32,427]
Amino acid sequence
Length: 700
>Phfumi.CG.MTP2014.S418.g01993.02.p
EEDVTIEPDGSDSDEEITIVSKKQRTQKKLERKGFNPDFHFEDDGFYETKWTLESALHNA
LKQKKIHTTLDQKIDQVRRKQIKLIPQDKPEDIDDLSDELVDDDEVENVGKIKTDKINPI
KRNRKRKAPAEEEDSSLPVPLAEIQDGSAGDKNMSWDSTLGFQEMNLSRPLLKSISEMNY
VTPTPIQQAAIPVGLLGRDIAACAATGTGKTAAFMLPVLERLLYRPQSSAFTRVLCLVPT
RELAVQVFSVTQQLAQHSSIRICLAAGGLDIKTQEAALRQGPDIVIATPGRLIDHLHNTP
SFDLRLVEILILDEADRMLDEFFEDQMNEIIKLCSHQRQTMLFSATMSEQVQELAAVSLK
NPVKIFVNSNTDVAPFLKQEFIRIRPNREGDREAIVAALCSRSFISNVLVFTQTKKQAHR
MHIVLGLLGLKAGELHGDLSQTQRLEGLRRFKNEDIDILVCTDLAARGLDIENVKTVINL
TMPNTQQHYVHRVGRTARAGKGGRSVSLVGESERKLLKEIIKFAKNQVKSRVVPAEVVNK
FADKLKQLEDEVGEVMQMEAHEKTILAQENQLKKAEKIVKGEAPEKRNWFQSKVQREMSR
AERMLGSHSKAPKKFKKSGGKKGASAPTTADARVEVELRKTREFQNRKLKRTRKEKRTRA
CAEQVPKVQVVSKSRPKKKSFFDAELTNTSKRKNAKHRNM
Nucleotide sequence
Length: 2,100
>Phfumi.CG.MTP2014.S418.g01993.02.t
GAAGAGGACGTGACCATTGAACCAGATGGTAGTGACTCAGATGAAGAGATTACCATTGTC
AGCAAAAAGCAAAGGACGCAAAAAAAGCTGGAAAGGAAGGGATTTAATCCCGACTTTCAT
TTTGAAGACGATGGCTTCTATGAAACAAAATGGACTTTGGAATCAGCACTGCACAATGCT
TTAAAACAAAAAAAAATTCACACAACATTGGATCAAAAAATTGACCAAGTGAGAAGAAAA
CAAATTAAGCTGATACCACAAGACAAGCCCGAGGACATTGATGACTTATCTGATGAGTTA
GTAGATGATGATGAGGTGGAAAATGTTGGCAAAATAAAAACAGACAAGATAAACCCTATT
AAGCGAAACAGAAAAAGAAAAGCTCCTGCTGAAGAAGAAGATTCAAGTTTACCTGTTCCT
CTTGCTGAAATACAAGATGGCAGTGCTGGTGATAAAAACATGTCATGGGATTCAACTTTG
GGTTTTCAGGAAATGAACCTGTCTAGGCCCCTGTTGAAATCCATCAGTGAAATGAACTAT
GTCACACCAACCCCTATTCAGCAAGCAGCAATACCTGTTGGTTTGCTTGGCAGAGATATA
GCAGCTTGTGCAGCAACTGGAACAGGCAAAACTGCTGCCTTCATGCTACCTGTCCTGGAA
CGACTTCTCTACCGTCCTCAGTCATCAGCCTTTACCAGAGTTCTCTGTCTTGTACCCACC
AGAGAGCTCGCCGTTCAAGTGTTTTCTGTAACCCAACAGCTTGCACAACACAGCTCAATT
AGAATATGTCTTGCTGCAGGTGGACTTGACATTAAAACACAGGAGGCAGCATTACGGCAA
GGGCCGGATATTGTCATCGCCACACCAGGTCGTTTAATTGATCATTTACACAACACACCT
TCATTCGACCTCCGTCTTGTTGAGATCCTTATTCTTGATGAGGCTGACAGAATGCTGGAT
GAATTTTTTGAAGATCAGATGAATGAAATCATCAAGTTATGTTCCCACCAAAGACAGACA
ATGTTGTTTTCTGCCACAATGTCTGAGCAGGTACAAGAACTTGCTGCAGTGTCCTTAAAA
AATCCGGTGAAAATATTTGTAAACAGCAACACTGATGTTGCACCGTTCCTGAAGCAGGAG
TTTATTCGAATTCGACCCAACAGAGAAGGAGATCGAGAAGCTATTGTTGCAGCTCTTTGC
AGCCGATCATTTATAAGTAACGTGTTGGTGTTTACTCAAACGAAAAAGCAAGCACACAGA
ATGCACATAGTTCTTGGATTACTTGGATTAAAGGCTGGAGAACTTCATGGAGATTTGTCC
CAAACTCAGCGTCTTGAAGGCTTAAGACGATTTAAGAATGAAGACATTGACATTCTTGTG
TGCACTGATCTTGCGGCTCGTGGTCTGGATATAGAAAATGTTAAAACAGTTATCAATTTA
ACGATGCCAAACACGCAACAACATTACGTGCATCGCGTTGGTCGGACCGCCAGAGCTGGC
AAAGGTGGTCGATCTGTTTCCTTGGTCGGCGAGAGCGAACGTAAACTTCTGAAGGAAATC
ATAAAGTTTGCGAAAAATCAAGTCAAAAGTCGCGTTGTCCCTGCAGAGGTTGTCAACAAA
TTTGCCGACAAACTGAAACAGCTGGAGGATGAAGTCGGTGAAGTGATGCAAATGGAAGCA
CACGAAAAAACGATTCTTGCACAGGAAAATCAACTAAAAAAGGCTGAGAAGATCGTTAAA
GGGGAAGCTCCGGAGAAGAGAAATTGGTTTCAGAGCAAAGTACAACGAGAAATGTCGCGA
GCTGAGCGAATGCTTGGATCGCATTCAAAAGCACCAAAGAAATTCAAGAAATCAGGCGGT
AAAAAGGGCGCATCAGCACCGACAACTGCCGATGCAAGGGTTGAAGTCGAATTACGAAAA
ACAAGAGAGTTTCAAAATCGAAAATTGAAGAGAACTCGAAAAGAAAAGCGCACTCGCGCA
TGCGCAGAGCAGGTTCCCAAAGTCCAGGTGGTTTCCAAATCGCGACCTAAAAAGAAGAGT
TTCTTCGATGCAGAACTCACAAACACAAGCAAAAGGAAAAACGCGAAACATCGAAATATG
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[154-367] 2.39E-66 - T[307-514] 3.97E-47 |
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[160-188] 11.768 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[179-380] 4.6E-58 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[184-354] 2.5E-46 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[191-365] 30.987 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[311-319] . |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[376-539] 20.428 |
| CDD |
Helicase_C (IPR001650) - T[381-508] 2.01361E-31 |
| Pfam |
Helicase_C (IPR001650) - T[394-500] 2.1E-26 |
| SMART |
Helicase_C (IPR001650) - T[419-500] 6.2E-28 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX27_HUMAN | 54.314 % | 701 | 0 |
| DDX47_HUMAN | 41.274 % | 275 | 4.09E-85 |
| DDX54_HUMAN | 39.353 % | 238 | 1.37E-67 |
