- Transcript 'Phfumi.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S418.g01993.01.t
Possible name(s)
DDX27; DDX47; DDX54
Gene model
Location
S418 [26,757 / 31,267]
Amino acid sequence
Length: 592
>Phfumi.CG.MTP2014.S418.g01993.01.p
MTDLIFTIENEEDVTIEPDGSDSDEEITIVSKKQRTQKKLERKGFNPDFHFEDDGFYETK
WTLESALHNALKQKLIPQDKPEDIDDLSDELVDDDEVENVGKIKTDKINPIKRNRKRKAP
AEEEDSSLPVPLAEIQDGSAGDKNMSWDSTLGFQEMNLSRPLLKSISEMNYVTPTPIQQA
AIPVGLLGRDIAACAATGTGKTAAFMLPVLERLLYRPQSSAFTRVLCLVPTRELAVQVFS
VTQQLAQHSSIRICLAAGGLDIKTQEAALRQGPDIVIATPGRLIDHLHNTPSFDLRLVEI
LILDEADRMLDEFFEDQMNEIIKLCSHQRQTMLFSATMSEQVQELAAVSLKNPVKIFVNS
NTDVAPFLKQEFIRIRPNREGDREAIVAALCSRSFISNVLVFTQTKKQAHRMHIVLGLLG
LKAGELHGDLSQTQRLEGLRRFKNEDIDILVCTDLAARGLDIENVKTVINLTMPNTQQHY
VHRVGRTARAGKGGRSVSLVGESERKLLKEIIKFAKNQVKSRVVPAEVVNKFADKLKQLE
DEVGEVMQMEAHEKTILAQENQLKKAEKIVKGEAPEKRNWFQSKVQREMSRG
Nucleotide sequence
Length: 1,776
>Phfumi.CG.MTP2014.S418.g01993.01.t
ATGACTGATTTAATTTTTACCATTGAAAATGAAGAGGACGTGACCATTGAACCAGATGGT
AGTGACTCAGATGAAGAGATTACCATTGTCAGCAAAAAGCAAAGGACGCAAAAAAAGCTG
GAAAGGAAGGGATTTAATCCCGACTTTCATTTTGAAGACGATGGCTTCTATGAAACAAAA
TGGACTTTGGAATCAGCACTGCACAATGCTTTAAAACAAAAACTGATACCACAAGACAAG
CCCGAGGACATTGATGACTTATCTGATGAGTTAGTAGATGATGATGAGGTGGAAAATGTT
GGCAAAATAAAAACAGACAAGATAAACCCTATTAAGCGAAACAGAAAAAGAAAAGCTCCT
GCTGAAGAAGAAGATTCAAGTTTACCTGTTCCTCTTGCTGAAATACAAGATGGCAGTGCT
GGTGATAAAAACATGTCATGGGATTCAACTTTGGGTTTTCAGGAAATGAACCTGTCTAGG
CCCCTGTTGAAATCCATCAGTGAAATGAACTATGTCACACCAACCCCTATTCAGCAAGCA
GCAATACCTGTTGGTTTGCTTGGCAGAGATATAGCAGCTTGTGCAGCAACTGGAACAGGC
AAAACTGCTGCCTTCATGCTACCTGTCCTGGAACGACTTCTCTACCGTCCTCAGTCATCA
GCCTTTACCAGAGTTCTCTGTCTTGTACCCACCAGAGAGCTCGCCGTTCAAGTGTTTTCT
GTAACCCAACAGCTTGCACAACACAGCTCAATTAGAATATGTCTTGCTGCAGGTGGACTT
GACATTAAAACACAGGAGGCAGCATTACGGCAAGGGCCGGATATTGTCATCGCCACACCA
GGTCGTTTAATTGATCATTTACACAACACACCTTCATTCGACCTCCGTCTTGTTGAGATC
CTTATTCTTGATGAGGCTGACAGAATGCTGGATGAATTTTTTGAAGATCAGATGAATGAA
ATCATCAAGTTATGTTCCCACCAAAGACAGACAATGTTGTTTTCTGCCACAATGTCTGAG
CAGGTACAAGAACTTGCTGCAGTGTCCTTAAAAAATCCGGTGAAAATATTTGTAAACAGC
AACACTGATGTTGCACCGTTCCTGAAGCAGGAGTTTATTCGAATTCGACCCAACAGAGAA
GGAGATCGAGAAGCTATTGTTGCAGCTCTTTGCAGCCGATCATTTATAAGTAACGTGTTG
GTGTTTACTCAAACGAAAAAGCAAGCACACAGAATGCACATAGTTCTTGGATTACTTGGA
TTAAAGGCTGGAGAACTTCATGGAGATTTGTCCCAAACTCAGCGTCTTGAAGGCTTAAGA
CGATTTAAGAATGAAGACATTGACATTCTTGTGTGCACTGATCTTGCGGCTCGTGGTCTG
GATATAGAAAATGTTAAAACAGTTATCAATTTAACGATGCCAAACACGCAACAACATTAC
GTGCATCGCGTTGGTCGGACCGCCAGAGCTGGCAAAGGTGGTCGATCTGTTTCCTTGGTC
GGCGAGAGCGAACGTAAACTTCTGAAGGAAATCATAAAGTTTGCGAAAAATCAAGTCAAA
AGTCGCGTTGTCCCTGCAGAGGTTGTCAACAAATTTGCCGACAAACTGAAACAGCTGGAG
GATGAAGTCGGTGAAGTGATGCAAATGGAAGCACACGAAAAAACGATTCTTGCACAGGAA
AATCAACTAAAAAAGGCTGAGAAGATCGTTAAAGGGGAAGCTCCGGAGAAGAGAAATTGG
TTTCAGAGCAAAGTACAACGAGAAATGTCGCGAGGT
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[145-358] 1.52E-66 - T[298-505] 2.82E-47 |
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[151-179] 11.768 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[170-371] 4.6E-58 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[175-345] 1.8E-46 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[182-356] 30.987 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[302-310] . |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[367-530] 20.428 |
| CDD |
Helicase_C (IPR001650) - T[372-499] 1.12603E-31 |
| Pfam |
Helicase_C (IPR001650) - T[385-491] 1.6E-26 |
| SMART |
Helicase_C (IPR001650) - T[410-491] 6.2E-28 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX27_HUMAN | 56.32 % | 669 | 0 |
| DDX47_HUMAN | 40.984 % | 275 | 4.33E-86 |
| DDX49_HUMAN | 35.405 % | 228 | 6.75E-68 |
