Aniseed - Transcript Card

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S4101.g06162.01.t

Possible name(s)

Phfumi.CG.MTP2014.S4101.g06162

Gene model

Phfumi.CG.MTP2014.S4101.g06162

Location

S4101 [4,597 / 4,978]

Sequences

Amino acid sequence

Length: 127

>Phfumi.CG.MTP2014.S4101.g06162.01.p
MRLKEQCKHYVRRSLRVRYGVAYRHLRRALVHQTRGRQLKVYATRKLRNQRLEAACEEHE
IRCNHLKQGLKASGVSLNNHMLNILSIYEPRTFEKLVELAERTEIERIYSMNESLPERRF
TADKTTI

Nucleotide sequence

Length: 381

>Phfumi.CG.MTP2014.S4101.g06162.01.t
ATGCGTTTAAAAGAACAGTGCAAACACTATGTAAGGCGCTCACTAAGAGTTCGTTATGGA
GTGGCGTACCGGCATCTGCGACGGGCACTAGTCCATCAAACCAGGGGAAGGCAACTGAAA
GTATATGCAACAAGAAAACTGCGAAACCAAAGATTGGAAGCTGCTTGTGAAGAACATGAA
ATAAGATGCAACCATTTGAAGCAAGGACTCAAGGCATCTGGTGTCTCCCTAAACAATCAT
ATGCTAAACATTTTGTCCATCTATGAGCCACGGACATTTGAAAAGCTTGTCGAACTTGCT
GAAAGAACTGAGATTGAAAGGATTTACAGTATGAATGAGTCATTGCCTGAAAGGCGTTTT
ACAGCAGATAAAACTACAATA

InterProScan

Pfam	Ribosomal_L20 (IPR005813) - T[6-96] 1.0E-15
PANTHER	Ribosomal_L20 (IPR005813) - T[8-110] 3.6E-23
SUPERFAMILY	Ribosomal_protein_L20_C (IPR035566) - T[13-100] 1.24E-17
Gene3D	Ribosomal_protein_L20_C (IPR035566) - T[45-104] 1.1E-13

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value