- Transcript 'Moocci.CG.ELv1_2.S46...' >
- Transcript 'Cisavi.CG.ENS81.R41....' >
- Transcript 'KH2012:KH.C5.108.v1....' >
- Transcript 'Phfumi.CG.MTP2014.S2...' >
- Transcript 'Phfumi.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S40.g00568.01.t
Possible name(s)
RCBTB1; SPOP; SPOPL
Gene model
Location
S40 [34,567 / 37,701]
Amino acid sequence
Length: 387
>Phfumi.CG.MTP2014.S40.g00568.01.p
MLPTPRVTAAASSSRSSSPAPPADLLGTPVAENWCYTQVKVVKFSYMWTINNFSFCREEM
GEVLRSSTFSSGANDKMKWCLRVNPKGLDEESKDYLSLYLLLVSCHKSEVRAKFKFSILN
SKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLMDETNGLLPDDKLTLFCEVSVVQDSV
NISGQSSMMQLKVPECRLATDLQSLLDQSSFTDCIFSVDGNEYKAHKAVVAARSPVFRAM
FEHEMEESKLNRVEIPDISHEVFKEMLSFLYTGTSPNLDEMAADLLAAADKYALERLKVM
CEESLCSNLSVENVAEILILADLHNASQLKEMAIDFINNHALDVMETGGFNLMVRSHPHL
VADAFRALAAIQSPPSGPPRKRLKSSN
Nucleotide sequence
Length: 1,164
>Phfumi.CG.MTP2014.S40.g00568.01.t
ATGTTGCCAACACCGAGGGTTACTGCAGCTGCATCTTCGTCTCGATCGAGCAGCCCAGCA
CCCCCAGCTGACCTGCTAGGAACCCCGGTTGCAGAGAATTGGTGTTACACTCAGGTGAAA
GTGGTAAAGTTTTCATACATGTGGACAATCAACAATTTCAGTTTCTGTCGTGAAGAAATG
GGAGAAGTTTTGAGAAGTTCAACGTTTTCATCTGGTGCCAATGACAAAATGAAATGGTGT
TTGCGTGTAAATCCAAAAGGTTTAGATGAAGAATCAAAAGATTATCTGTCTCTCTACCTC
CTTCTTGTGTCCTGCCATAAAAGTGAAGTCCGGGCAAAATTCAAGTTTTCAATTTTAAAC
AGCAAACGTGAAGAAACAAAAGCAATGGAGAGTCAGCGTGCCTATAGATTTGTGCAGGGC
AAAGACTGGGGATTTAAAAAGTTTATACGACGAGATTTTTTGATGGATGAAACAAATGGA
TTATTACCAGATGACAAACTGACCTTATTTTGTGAGGTAAGCGTTGTTCAAGATTCTGTG
AACATATCAGGTCAGTCTAGTATGATGCAACTAAAAGTGCCTGAGTGTCGCTTAGCAACA
GACCTCCAAAGCCTCCTCGACCAATCATCTTTCACCGATTGTATTTTTTCTGTTGACGGA
AATGAATACAAAGCACACAAGGCTGTTGTTGCAGCCCGGTCACCAGTTTTTCGTGCCATG
TTCGAACATGAGATGGAGGAAAGTAAATTAAACCGAGTTGAAATTCCCGATATTTCTCAT
GAAGTTTTTAAGGAAATGTTAAGTTTCCTCTACACAGGGACGTCACCAAACCTTGATGAG
ATGGCAGCTGATTTACTTGCAGCAGCTGACAAGTATGCCTTGGAGAGGCTGAAGGTTATG
TGTGAAGAATCATTGTGCTCAAACTTATCTGTGGAAAATGTTGCAGAAATATTGATCCTT
GCTGATTTGCACAACGCTTCACAATTGAAGGAAATGGCGATTGACTTCATAAACAACCAT
GCACTTGACGTCATGGAAACAGGCGGTTTTAATCTGATGGTGCGTTCACATCCCCATCTA
GTGGCAGATGCGTTCCGAGCTTTGGCTGCCATCCAATCTCCACCATCAGGGCCACCAAGG
AAACGACTAAAATCTTCAAATTAA
| SUPERFAMILY |
TRAF-like (IPR008974) - T[41-182] 8.83E-46 |
| Gene3D |
TRAF-like (IPR008974) - T[41-178] 3.5E-43 |
| ProSiteProfiles |
MATH/TRAF_dom (IPR002083) - T[43-173] 28.42 |
| SMART |
MATH/TRAF_dom (IPR002083) - T[48-154] 8.2E-15 |
| Pfam |
MATH/TRAF_dom (IPR002083) - T[77-173] 1.0E-6 |
| SUPERFAMILY |
SKP1/BTB/POZ_sf (IPR011333) - T[189-307] 2.88E-33 |
| Pfam |
BTB/POZ_dom (IPR000210) - T[202-308] 2.3E-32 |
| ProSiteProfiles |
BTB/POZ_dom (IPR000210) - T[212-273] 18.968 |
| SMART |
BTB/POZ_dom (IPR000210) - T[212-309] 6.0E-28 |
| CDD |
SPOP_C (IPR034089) - T[309-370] 1.22186E-24 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPOP_HUMAN | 79.088 % | 597 | 0 |
| SPOPL_HUMAN | 74.68 % | 579 | 0 |
| RCBT1_HUMAN | 32.051 % | 80.1 | 2.67E-16 |