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TRANSCRIPT CARD

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  1. Clone 'cien58426' > 
  2. Transcript 'Moocci.CG.ELv1_2.S59...' > 
  3. Transcript 'Phfumi.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S3922.g06045.01.t

Possible name(s)

CDH12; CDH18; CDH6

Gene model

Phfumi.CG.MTP2014.S3922.g06045

Location

S3922 [2,622 / 3,406]

Sequences

Amino acid sequence

Length: 133

>Phfumi.CG.MTP2014.S3922.g06045.01.p
MSSPPSTKVSLLPPYDPTSSRRRPIPSQDIRDFVIDRKTAEDDDDRKLAFDSLQIYAYEG
VGSDAGSLSSLCTSSDESVQDYDYLCEWGPRFQKIADIYGAGKPDYSDSDNGASKASADL
MRDTLSRPGRFKH

Nucleotide sequence

Length: 402

>Phfumi.CG.MTP2014.S3922.g06045.01.t
ATGTCAAGCCCGCCATCTACTAAGGTCAGTCTGCTGCCACCTTACGATCCAACATCGAGC
AGAAGGAGACCTATTCCGAGTCAGGACATTCGGGATTTTGTAATCGACAGAAAGACTGCC
GAGGACGACGATGACCGAAAACTTGCCTTCGATTCTCTGCAGATCTACGCATACGAGGGT
GTCGGATCTGATGCCGGTTCGCTCAGCAGCCTTTGCACTTCGTCAGACGAAAGTGTTCAA
GATTACGACTATCTGTGCGAGTGGGGACCCCGATTTCAGAAAATTGCTGACATCTATGGA
GCCGGAAAACCCGACTATTCTGATTCCGACAATGGAGCTTCCAAAGCAAGTGCCGACCTG
ATGAGAGACACTCTTTCCCGGCCTGGAAGGTTCAAGCACTAA

InterProScan

Gene3D
Catenin_binding_dom_sf (IPR027397) - T[10-105] 9.3E-29
Pfam
Cadherin_cytoplasmic-dom (IPR000233) - T[25-101] 3.9E-27

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CADH6_HUMAN 50.602 % 80.5 1.15E-18
CAD11_HUMAN 53.75 % 82.8 2.02E-19
CAD10_HUMAN 49.425 % 79.7 2.36E-18