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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S38.g00554.01.t

Possible name(s)

RPAIN

Gene model

Phfumi.CG.MTP2014.S38.g00554

Location

S38 [88,005 / 88,644]

Sequences

Amino acid sequence

Length: 212

>Phfumi.CG.MTP2014.S38.g00554.01.p
MERMRTPDSAAKRKALYKCGSPVSWRETYKNRCKERLKGSRSKLLDRYRKVDTIPESGLE
KLMDDEWLKMRSEGFSSDQCGSFDDVLLTLEDIKQELLEWEAETLLQMDSNTVNADIDHH
DLNDPTNTLLCPICNISYLAVQNGFLICSCGLSINMEQDSLSLANVKACLEEGVSCHLKN
CNLRPHFSIVDNFGNSNLLLTCPGCDFMFIVV

Nucleotide sequence

Length: 639

>Phfumi.CG.MTP2014.S38.g00554.01.t
ATGGAACGTATGCGAACTCCAGATTCGGCAGCAAAACGAAAAGCTTTGTATAAATGTGGT
TCACCGGTCTCCTGGCGGGAAACGTACAAAAACAGATGCAAAGAGAGACTAAAGGGAAGT
AGATCTAAACTCCTTGACAGATATCGAAAAGTAGACACAATACCAGAAAGTGGTCTTGAA
AAATTAATGGATGATGAATGGCTTAAAATGCGCTCTGAAGGATTTTCATCCGATCAGTGC
GGAAGTTTTGATGATGTACTGCTTACATTGGAGGATATTAAACAAGAACTACTTGAATGG
GAAGCGGAAACACTTTTACAAATGGATTCAAATACAGTAAATGCTGATATAGACCATCAT
GACTTGAACGATCCTACAAACACACTACTTTGTCCTATCTGCAACATAAGCTATCTTGCT
GTACAGAATGGCTTTTTAATATGTTCTTGTGGATTAAGTATAAATATGGAGCAAGACTCT
TTGTCACTGGCAAATGTTAAAGCATGCTTAGAGGAAGGGGTTTCTTGTCATTTAAAAAAT
TGCAATTTGCGGCCACACTTCAGCATTGTAGACAACTTTGGAAACTCGAATCTTTTGTTA
ACTTGCCCGGGGTGTGATTTTATGTTTATTGTTGTGTAA

InterProScan

PANTHER
RIP (IPR028156) - T[4-212] 2.6E-46
Pfam
RPA_interact_N_dom (IPR028158) - T[13-50] 1.3E-11
Pfam
RPA_interact_C_dom (IPR028159) - T[130-208] 1.7E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RIP_HUMAN 30 % 107 6.64E-29