- Transcript 'Moocci.CG.ELv1_2.S24...' >
- Transcript 'KH2012:KH.L121.1.v2....' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Molecular Tool 'Ci-TCF-MO (Lemaire Lab)' >
- Transcript 'Phfumi.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S3856.g06000.01.t
Possible name(s)
DLC1; STARD13; STARD8
Gene model
Location
S3856 [6,920 / 13,988]
Amino acid sequence
Length: 999
>Phfumi.CG.MTP2014.S3856.g06000.01.p
QVKDAQTDDDEVEDDEQCAISEYWRFEEDGRRWSRLDSKDSDLNRNPSSASSKLLPHVDE
VQEDAGDVFAAEERLSSAGSDDPSPPAQQRPIIDGALKHSGIKLGKSKSNSFLRRVDLRK
FRPGSFRRHQRTGSADVDPRTASKARPLADVKTKSMRKGGKTIVISDPVLKSGHEKIDNM
RCLPIEQSAANGVANLQNQHRGRKNSSQSLISSSSSSGSGAASTASTPATRLRSFTEDFA
LKSDSGETENSSRLFSRPHLEASSNKSRSQTLPDPESTIFMMPKDHVPGKFPSAIRELGS
DGEALPLSGGSESDSNSGRNQRPVSIYDNLPESALSGAASAQDLMNILDPTARSVDDSGV
FVGGSQESLDVGAPVPTDAAFWSVDDIVERTHSLQQMVRSWEDEEDNKSDQPDQVVLPSY
SSENISSAEDETGTASKGTNSDHIHRLRQARLRWQSFNRDHGPGSQSQQTLQLHNLSVGQ
LMILRRLSMLKLTALLESYAFNTSKGSLSWSVPRFIRRIKVPDYKDKAVFSVPLLQNVKR
FGQPLPQCIQHALAFLRRTALDQVGLFRKPGVRSRIQKLRANCENNPLLANFEECSAYDV
ADMVKQFFRELPDPLMTMKLSETFIGIFLYVPKELWLQTLQAAVMLLPDETRETLKTLLC
FLSDVSSRSDENHMNETNLATCFAPSLFYQQFGSIKSTSSSSPKVRKQQAGKGATALALG
RPDMKEMNENAAANNCLAFMIRHVKELFKISEDAMTQCRMSVMQQNEDVLADEIGYTPDM
GDEGDYYADFHAYVDRIVTQTMREEQRVSQNKGGWQTVPSAPGSELMYKKMNDDNPLRMW
RCQVEIEGADVRQVTDRVLNERHMWDDDLVQWKVIQQPDERTQLFQTVRAEMSPHPTRDY
CVLRSWRTNASPRGACVIVEASTSQPNLLGDVRGVVLTSRYVIEPTDNPSKCLLTHVSRV
DTKGRNPEWYNKMFGHIDSQLLLRLRDSIRVMPPKVAST
Nucleotide sequence
Length: 3,000
>Phfumi.CG.MTP2014.S3856.g06000.01.t
CAGGTGAAAGATGCGCAGACGGACGACGATGAGGTGGAGGATGATGAGCAGTGCGCCATT
AGCGAGTACTGGAGGTTCGAGGAGGACGGAAGAAGATGGTCAAGACTCGACAGCAAGGAT
TCGGATCTCAACAGAAATCCTTCGAGTGCTTCAAGCAAGTTGCTGCCACATGTTGACGAA
GTGCAGGAGGACGCCGGTGACGTATTTGCTGCCGAAGAGCGACTCTCTAGCGCCGGTAGT
GATGATCCTTCCCCTCCCGCCCAGCAACGCCCCATTATTGATGGAGCTCTGAAGCACAGC
GGAATAAAACTGGGAAAGTCGAAAAGCAACAGCTTCCTACGCCGGGTCGACCTCCGAAAA
TTCCGGCCCGGTTCCTTTCGGCGCCACCAGCGAACCGGTTCCGCTGACGTAGATCCTAGA
ACAGCCAGCAAAGCGCGCCCATTGGCTGATGTGAAGACTAAGTCGATGCGCAAGGGAGGG
AAGACGATTGTCATCAGCGATCCGGTTCTGAAGAGCGGTCATGAGAAGATTGACAACATG
AGATGTCTTCCTATTGAACAATCGGCTGCAAACGGAGTCGCCAACCTCCAGAATCAGCAC
CGCGGAAGAAAGAACTCCTCCCAGTCACTTATCAGCTCTTCATCCTCATCTGGAAGCGGA
GCAGCTAGCACCGCCTCCACTCCTGCTACCCGTCTTCGTTCCTTCACTGAGGATTTCGCT
TTAAAGTCTGATTCTGGTGAAACCGAAAACTCTTCTCGCCTTTTCTCGCGTCCTCATCTC
GAAGCTTCATCCAATAAGTCAAGATCACAAACTCTTCCCGACCCCGAATCGACAATCTTC
ATGATGCCAAAGGATCATGTTCCCGGGAAATTTCCCTCTGCCATCCGGGAGCTTGGATCT
GATGGGGAAGCTCTTCCTCTTTCAGGAGGAAGCGAGTCCGACTCCAACTCCGGGAGAAAC
CAGCGTCCGGTCAGCATCTACGACAACCTCCCGGAGAGCGCTCTCAGTGGCGCAGCATCC
GCTCAAGATCTCATGAACATCCTGGATCCCACCGCAAGATCAGTGGACGACTCCGGAGTC
TTCGTGGGTGGGAGTCAAGAATCTTTGGATGTTGGTGCTCCAGTGCCGACGGATGCTGCT
TTCTGGAGCGTGGATGACATCGTGGAGAGGACACACAGCCTCCAGCAGATGGTGAGATCG
TGGGAAGATGAGGAGGACAACAAGTCGGATCAACCGGATCAAGTCGTCCTCCCAAGCTAC
AGCTCAGAGAACATTTCATCGGCCGAAGACGAAACAGGGACAGCTTCTAAAGGCACCAAC
AGCGACCACATACACAGACTGAGACAAGCTCGACTCAGATGGCAGAGTTTCAACCGCGAT
CATGGGCCAGGCTCGCAATCACAACAAACTTTACAACTCCACAACCTCTCTGTGGGACAA
CTCATGATTCTCCGCCGTCTGTCGATGCTGAAACTTACAGCGTTGCTTGAGAGTTACGCG
TTTAACACCAGTAAAGGATCTTTGAGTTGGTCCGTACCTCGCTTCATCCGTCGCATCAAG
GTGCCCGACTACAAAGACAAAGCGGTCTTCAGTGTTCCACTGCTCCAGAACGTCAAGCGG
TTCGGTCAGCCTCTCCCGCAATGCATACAACACGCCCTCGCTTTCCTCCGTCGCACGGCG
CTCGACCAAGTCGGATTATTCCGCAAACCCGGTGTGAGATCCCGGATACAGAAGTTGAGA
GCGAATTGCGAAAACAATCCACTTCTCGCCAATTTTGAGGAGTGTAGCGCTTATGACGTG
GCGGATATGGTGAAACAGTTTTTCCGTGAACTTCCTGACCCGCTTATGACCATGAAACTG
TCGGAAACTTTTATCGGCATCTTTCTATACGTCCCGAAAGAACTGTGGCTTCAAACTCTC
CAGGCAGCCGTCATGCTTCTTCCTGATGAGACGCGGGAAACACTTAAGACCCTCCTCTGC
TTCCTCAGTGACGTTTCATCGCGATCCGACGAGAATCACATGAACGAGACGAACCTCGCC
ACTTGTTTTGCCCCCTCGCTATTCTACCAGCAATTCGGCAGCATCAAAAGTACCTCGTCA
TCCTCGCCAAAGGTGCGAAAGCAGCAGGCGGGCAAAGGAGCGACAGCGCTGGCGCTCGGA
CGACCCGACATGAAAGAAATGAACGAGAACGCGGCCGCCAACAACTGCTTGGCGTTCATG
ATTCGTCACGTCAAGGAGCTTTTCAAGATCTCGGAAGACGCGATGACGCAATGCCGCATG
TCTGTGATGCAACAAAACGAAGACGTGCTTGCTGACGAGATCGGCTACACACCCGACATG
GGCGACGAGGGCGATTATTACGCCGACTTTCACGCCTATGTTGATCGCATTGTGACGCAA
ACAATGCGTGAAGAACAGCGCGTGTCGCAGAACAAAGGAGGATGGCAGACTGTCCCTAGC
GCACCTGGAAGTGAACTTATGTATAAGAAGATGAACGACGACAACCCACTTCGTATGTGG
CGATGTCAGGTTGAGATCGAAGGGGCTGACGTCAGACAAGTGACAGACCGTGTGCTGAAC
GAACGTCACATGTGGGACGATGACCTTGTCCAGTGGAAGGTCATTCAACAACCTGATGAA
CGAACTCAGCTCTTCCAAACCGTCAGAGCTGAGATGAGTCCTCATCCGACGAGAGATTAT
TGCGTTTTAAGATCCTGGAGGACAAACGCCAGCCCACGTGGTGCTTGCGTCATCGTCGAG
GCCTCCACCAGCCAACCCAACCTCCTTGGTGACGTCAGAGGTGTCGTGCTGACGTCACGT
TACGTCATCGAGCCCACCGACAACCCGTCAAAGTGCCTCCTCACCCACGTGAGTCGCGTT
GACACGAAGGGACGCAACCCCGAATGGTACAACAAGATGTTCGGCCACATCGACTCTCAG
CTCTTACTCCGACTCAGGGACTCGATTCGCGTCATGCCGCCCAAGGTCGCTTCCACGTGA
| Gene3D |
Rho_GTPase_activation_prot (IPR008936) - T[517-747] 2.7E-67 |
| SUPERFAMILY |
Rho_GTPase_activation_prot (IPR008936) - T[526-748] 2.94E-45 |
| ProSiteProfiles |
RhoGAP_dom (IPR000198) - T[532-748] 36.443 |
| SMART |
RhoGAP_dom (IPR000198) - T[543-745] 8.4E-51 |
| Pfam |
RhoGAP_dom (IPR000198) - T[546-692] 1.0E-36 |
| SMART |
START_lipid-bd_dom (IPR002913) - T[797-998] 1.5E-12 |
| Pfam |
START_lipid-bd_dom (IPR002913) - T[803-976] 6.4E-24 |
| ProSiteProfiles |
START_lipid-bd_dom (IPR002913) - T[814-970] 20.511 |
| Gene3D |
START-like_dom_sf (IPR023393) - T[814-993] 9.9E-45 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RHG07_HUMAN | 35.674 % | 520 | 1.36E-163 |
| STA13_HUMAN | 34.899 % | 519 | 3.05E-167 |
| STAR8_HUMAN | 39.599 % | 387 | 2.83E-118 |