- Clone 'cien202507' >
- Transcript 'Harore.CG.MTP2014.S8...' >
- Transcript 'Moocci.CG.ELv1_2.S51...' >
- Transcript 'Phfumi.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S3720.g05921.01.t
Possible name(s)
KCNQ1; KCNQ3; KCNQ4
Gene model
Location
S3720 [2,179 / 8,984]
Amino acid sequence
Length: 439
>Phfumi.CG.MTP2014.S3720.g05921.01.p
QSTLSAMIGNDIKAMKPRRRVFFDRRKFQQKAYNFLERPTGIKCFVYHVVVFMLVLVCLI
FSVLSTIEGQEQDNVKVLLIMEAILVVVFSVEYSVRLWSAGSIGKYKGLRGRLKFARKPI
CVIDLAVVCASATILLVGRNGNVFAASAIRGIRFLQILRMLHVDRQGGTWRLLGSVVYIH
RQELITTLYIGFLALIFSSYFVYLAEKPSIEDRASRKPGEDERGKFRSYADALWWGVVTV
TTIGYGDHVPVTWLGKIIASCFSIFAISFFALPAGILGSGFALKVQQKQRQKQFNRQIPA
AASLIQATWRCYATMDDTNCSGTWRTYKLPKKRELSNSGSCHDDVFDGRSSKGGSLKRDR
PVFRLGSKESKSDETRLGRVRGFCSWTFELKLEDNPANEMPEAYKNAVRASRLLLYYLAK
KRFQNSRKPYDVRDVVEQY
Nucleotide sequence
Length: 1,317
>Phfumi.CG.MTP2014.S3720.g05921.01.t
CAGTCGACTTTGTCGGCGATGATCGGCAACGACATCAAAGCGATGAAACCGAGAAGACGA
GTGTTTTTCGATCGTCGTAAGTTCCAACAGAAAGCTTACAACTTCCTCGAGCGCCCCACG
GGAATCAAATGTTTTGTCTACCACGTCGTTGTGTTTATGTTGGTCCTCGTGTGCCTCATA
TTCAGTGTTCTGTCAACTATCGAAGGACAGGAACAAGACAACGTGAAGGTGTTACTCATA
ATGGAGGCGATCCTGGTTGTAGTCTTCAGTGTGGAATATTCAGTACGGCTCTGGTCGGCA
GGAAGCATTGGAAAGTACAAAGGATTAAGGGGTCGACTGAAATTTGCAAGGAAGCCAATT
TGTGTAATAGATCTTGCAGTGGTTTGTGCCTCGGCCACGATTTTGCTGGTTGGAAGAAAC
GGAAACGTGTTCGCTGCCTCGGCAATCCGAGGGATTCGGTTCCTGCAGATCCTCAGGATG
TTGCACGTCGATCGACAGGGAGGAACTTGGCGGTTGCTAGGCAGCGTGGTTTATATTCAT
CGTCAGGAGCTCATCACAACTCTCTACATCGGATTTCTCGCTCTGATATTCTCGTCCTAC
TTTGTGTATTTGGCCGAAAAACCGTCAATTGAGGATAGAGCATCAAGAAAACCCGGCGAG
GACGAAAGAGGAAAATTCAGAAGTTACGCTGACGCTCTGTGGTGGGGTGTGGTTACAGTC
ACGACGATTGGCTACGGAGATCACGTGCCGGTCACGTGGTTGGGCAAAATCATCGCTTCG
TGTTTCTCCATCTTTGCTATTTCCTTCTTTGCCCTTCCTGCGGGAATACTTGGGTCTGGG
TTTGCTCTCAAGGTTCAACAGAAGCAACGTCAGAAACAGTTCAACCGACAGATTCCGGCC
GCAGCGTCGCTTATTCAAGCCACATGGCGTTGCTACGCGACGATGGATGATACGAACTGC
AGCGGCACCTGGCGGACATACAAACTTCCCAAGAAGAGGGAACTGAGCAACAGCGGTAGT
TGCCATGACGACGTGTTTGATGGGCGCAGCAGCAAGGGTGGGTCGCTAAAGAGGGACCGT
CCCGTGTTTCGACTTGGTTCCAAGGAAAGCAAAAGCGACGAAACGCGATTGGGGCGAGTG
CGAGGATTCTGCTCGTGGACTTTTGAGCTGAAGCTTGAGGACAATCCAGCTAATGAAATG
CCCGAAGCATACAAGAACGCTGTAAGAGCGTCAAGGCTTCTGCTTTATTACTTGGCCAAG
AAGCGATTTCAGAATTCGCGCAAACCGTATGATGTGCGTGACGTGGTAGAGCAATAT
| PANTHER |
VG_K_chnl (IPR028325) - T[9-439] 1.4E-193 |
| PRINTS |
VG_K_chnl (IPR028325) - T[38-66] 1.0E-17 - T[80-103] 1.0E-17 - T[154-180] 1.0E-17 - T[226-248] 1.0E-17 - T[255-281] 1.0E-17 |
| Pfam |
Ion_trans_dom (IPR005821) - T[46-284] 1.3E-26 |
| PRINTS |
K_chnl_volt-dep_KCNQ (IPR003937) - T[88-107] 1.7E-24 - T[108-127] 1.7E-24 - T[170-189] 1.7E-24 |
| Pfam |
K_chnl_volt-dep_KCNQ_C (IPR013821) - T[396-439] 1.2E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| KCNQ1_HUMAN | 71.845 % | 435 | 1.45E-147 |
| KCNQ4_HUMAN | 42.545 % | 367 | 7.1E-121 |
| KCNQ5_HUMAN | 42.766 % | 364 | 3.1E-117 |