- Transcript 'Phfumi.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S36.g00528.01.t
Possible name(s)
DDX24; DDX47
Gene model
Location
S36 [10,342 / 16,965]
Amino acid sequence
Length: 692
>Phfumi.CG.MTP2014.S36.g00528.01.p
SMYGGQVKSIVANESWESIPLVVGGRDTPAPKFKDLIEFEELTDYSLVGEGWKPEESNFT
TSKKQPSSNKKRKKDRQAKQKALKRKLFLTELENNANSDGILTSNTNKKQKLAGKLNATC
SNNKIEENMIDVVDTSAWNSLFVPEPILKALAELGFSKPMPIQEQTLPIAIRDKRDVLGA
AETGSGKTLAFGIPLLHHLMEDKERNLLPSTAKDQLAIVEEEPSSDFEDDALTNDGAGNN
ALPAEKVLPALILTPTRELAIQVKSHLMKIAKYSGLWVVSVVGGMAAQKQTRLLSKGPDV
VVATPGRLWELMDSGHPYLGHLHKLRYLVIDEADRMLEKGHFEDLTRLLDAIKRRGADKK
RQTYVFSATLTTVHQGPNRKNLKGVSEGPMKSGKLDKLVKRIGMRQKPHIVDLTTSKVTA
EKLSEAKIICDVSEKDFYLYYFLKSYPGRTLIFTNSIDCIFRLSGILEVLGCRPLHIHAK
MQQRQRLKHLERFQADDTSVMIASDVAARGLDIPDVKHVIHYQVPRTMETYIHRSGRSAR
SGKNGLSLMFVSADEMIFYKRVCKSLKKDDGMPLFVVNQNYMAAVRKRVNIARDIDKMSH
KIKKANLHNDWFKKNAEAMEMEVDEDMLLNTDDDDELKQVISSRKQQLATLLKKPIFPKG
FSGKFITQTGELSLPGIKTGNAISNRRPKKMK
Nucleotide sequence
Length: 2,076
>Phfumi.CG.MTP2014.S36.g00528.01.t
AGTATGTATGGTGGCCAAGTAAAATCAATTGTAGCGAATGAAAGTTGGGAATCTATTCCA
CTGGTGGTTGGTGGAAGAGATACCCCTGCACCAAAGTTCAAGGACCTGATTGAGTTTGAG
GAACTTACAGATTATTCATTGGTTGGAGAGGGATGGAAACCAGAAGAAAGCAATTTCACC
ACTTCGAAAAAACAACCTAGCTCAAACAAAAAAAGGAAAAAGGATCGCCAAGCAAAGCAG
AAAGCTTTGAAAAGGAAGCTGTTTTTGACTGAACTTGAAAACAACGCAAATAGTGATGGA
ATTTTAACATCAAACACCAATAAAAAACAGAAGTTAGCTGGAAAACTCAATGCTACCTGC
AGTAATAATAAAATTGAAGAAAATATGATTGATGTAGTTGACACATCAGCATGGAATTCA
TTGTTTGTACCAGAACCAATACTAAAAGCATTGGCAGAACTTGGATTTTCAAAACCAATG
CCAATACAGGAACAGACTCTGCCTATTGCTATTCGTGATAAACGGGATGTCTTGGGGGCT
GCTGAAACAGGTAGTGGTAAAACACTAGCTTTTGGAATTCCTCTTTTACATCACCTAATG
GAAGACAAAGAGAGGAATCTGCTTCCTAGCACAGCAAAGGATCAACTAGCAATTGTTGAA
GAAGAACCATCGAGCGACTTTGAAGATGATGCCCTGACTAATGATGGGGCGGGCAATAAT
GCTCTTCCTGCAGAAAAAGTACTGCCAGCATTAATACTGACTCCTACAAGAGAACTAGCA
ATTCAGGTGAAAAGTCATTTAATGAAAATTGCCAAGTACAGTGGCCTTTGGGTAGTGTCT
GTGGTTGGTGGAATGGCTGCACAAAAACAAACAAGACTGCTCTCAAAGGGACCCGATGTG
GTTGTTGCAACCCCTGGTAGACTCTGGGAGCTGATGGACTCAGGGCACCCTTATTTAGGT
CATTTGCACAAACTGCGTTATCTGGTAATTGACGAAGCTGACAGAATGCTGGAAAAGGGC
CACTTTGAAGATCTTACGCGATTACTGGATGCCATCAAGAGAAGAGGGGCCGACAAGAAA
CGCCAAACCTACGTTTTTTCTGCGACCCTCACCACTGTCCACCAAGGCCCGAATCGTAAA
AACTTGAAAGGGGTCAGTGAGGGGCCAATGAAGAGTGGTAAGCTAGACAAACTGGTCAAG
CGGATTGGCATGAGGCAGAAACCGCACATCGTTGACCTTACTACGAGTAAAGTGACTGCG
GAGAAACTATCAGAAGCGAAAATTATTTGTGATGTTTCCGAGAAAGATTTCTATCTCTAT
TACTTTCTAAAGTCGTACCCGGGCCGAACGCTGATTTTTACGAACAGCATCGACTGTATT
TTTCGCCTGTCCGGTATCCTTGAAGTTCTCGGGTGTCGTCCGCTTCACATCCACGCTAAA
ATGCAGCAACGCCAGCGACTTAAACATCTCGAACGTTTCCAAGCCGACGACACGTCAGTA
ATGATCGCAAGTGACGTCGCAGCTCGAGGCCTCGATATCCCGGATGTAAAGCACGTGATC
CACTACCAAGTTCCCCGAACTATGGAGACGTACATTCATAGGAGCGGTCGCTCGGCGCGC
TCAGGTAAAAATGGGTTAAGTCTGATGTTCGTAAGCGCCGATGAGATGATTTTTTACAAA
CGAGTCTGCAAATCCTTGAAGAAGGACGACGGGATGCCCTTGTTTGTCGTCAACCAAAAT
TACATGGCTGCTGTTCGCAAACGCGTCAACATCGCACGCGACATAGATAAAATGTCGCAC
AAAATCAAAAAGGCTAATCTGCACAACGACTGGTTTAAAAAGAACGCCGAAGCGATGGAA
ATGGAAGTAGATGAGGATATGTTGCTTAATACTGACGATGACGACGAACTGAAACAAGTC
ATAAGTTCCAGAAAACAACAGCTTGCTACGCTATTGAAGAAACCTATTTTTCCCAAAGGA
TTTTCAGGGAAGTTTATCACACAGACTGGCGAGCTCTCCCTGCCCGGTATTAAAACTGGA
AATGCCATTTCCAACAGGAGGCCGAAAAAGATGAAA
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[136-164] 10.649 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[155-402] 5.3E-47 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[161-371] 3.2E-43 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[168-388] 26.536 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[249-561] 3.35E-62 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[329-337] . |
| CDD |
Helicase_C (IPR001650) - T[433-550] 2.10832E-28 |
| Pfam |
Helicase_C (IPR001650) - T[436-542] 1.3E-26 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[438-583] 19.059 |
| SMART |
Helicase_C (IPR001650) - T[461-542] 1.2E-25 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX47_HUMAN | 30.063 % | 219 | 4.37E-64 |
| DDX49_HUMAN | 30.178 % | 194 | 9.46E-55 |
| DDX24_HUMAN | 48.993 % | 450 | 2.0E-147 |
