- Transcript 'Phfumi.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S3647.g05863.01.t
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
S3647 [12,059 / 13,680]
Amino acid sequence
Length: 355
>Phfumi.CG.MTP2014.S3647.g05863.01.p
MADVFSFGVKPISCHSFNHDRSQLALSLNDNDVQIYKKSGKKWDLIHTLSEHTLKVTGID
WAPKTNRIVTCGADRNAYVWQLTDGVWVQELVILRINRAATCVKWSPEEDKFAVGSSSRM
ISICYFESDNNWSTIVTLDWHPNNILLAAGCCDYKAYVFSAYIKEINAKPGATVWGKKMN
FGNLMQEVVMPCTGWVHGVSFSPSGNRLAMVSHGSIVSVVTGGAELVCQRTEHLPFNDCM
WITENSFVAAGHDCNPMLFTVDGGCTKVDFSCKLDQPPKSGGGGRAVSAMNMFKMMDKKG
AVETGGKEIETKHKNAITQLYAYGPNKFSSAGKDGNVVVWDAKSLESSIAGLRIA
Nucleotide sequence
Length: 1,068
>Phfumi.CG.MTP2014.S3647.g05863.01.t
ATGGCGGACGTTTTTAGTTTCGGTGTGAAACCAATATCCTGTCATTCCTTTAATCATGAT
CGCTCCCAACTTGCACTTAGTTTGAATGATAATGATGTACAAATTTACAAAAAATCTGGG
AAGAAATGGGACCTCATTCATACCTTGAGTGAACACACCCTTAAAGTAACAGGGATTGAC
TGGGCACCAAAAACAAACCGCATTGTGACATGTGGAGCTGACCGTAATGCTTATGTATGG
CAGTTGACTGATGGAGTATGGGTCCAGGAGTTGGTCATTCTGAGGATTAACCGTGCTGCT
ACATGTGTGAAATGGTCCCCTGAGGAAGACAAGTTTGCTGTTGGTAGCTCCTCCAGAATG
ATTTCTATTTGCTACTTTGAAAGTGACAACAATTGGTCTACTATTGTCACTCTTGACTGG
CATCCCAACAATATACTGCTTGCTGCTGGCTGTTGTGATTACAAGGCATACGTGTTTTCA
GCATACATTAAAGAAATTAATGCTAAGCCAGGTGCAACTGTATGGGGAAAGAAAATGAAT
TTTGGCAACCTCATGCAAGAAGTTGTAATGCCATGCACTGGATGGGTACATGGAGTGTCA
TTTTCACCAAGTGGCAATCGCCTTGCTATGGTTTCCCATGGCAGTATCGTGTCGGTGGTG
ACTGGTGGTGCTGAACTGGTATGTCAACGAACTGAGCACTTGCCATTTAACGACTGTATG
TGGATAACGGAAAACAGCTTTGTGGCTGCTGGACACGACTGCAACCCTATGTTGTTTACT
GTGGATGGTGGATGCACAAAAGTTGATTTCTCTTGCAAGCTTGATCAGCCACCAAAGAGT
GGTGGTGGGGGCCGTGCAGTGTCTGCCATGAATATGTTTAAAATGATGGATAAAAAGGGA
GCAGTTGAAACCGGTGGCAAGGAAATTGAAACAAAACATAAAAATGCTATTACACAGTTG
TATGCATATGGACCAAATAAATTTTCGAGTGCTGGCAAAGATGGAAATGTGGTAGTTTGG
GATGCAAAGTCACTGGAATCATCCATTGCAGGACTACGCATTGCCTAA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1-342] 4.1E-130 |
| PIRSF |
ARPC1 (IPR017383) - T[1-347] 5.4E-129 |
| PANTHER |
ARPC1 (IPR017383) - T[3-353] 2.1E-135 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[10-345] 1.01E-41 |
| SMART |
WD40_repeat (IPR001680) - T[42-81] 1.1E-6 - T[90-125] 12.0 - T[128-160] 100.0 - T[185-221] 19.0 - T[304-341] 3.1 |
| Pfam |
WD40_repeat (IPR001680) - T[43-80] 7.0E-4 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[49-90] 11.578 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[49-90] 10.997 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 54.717 % | 387 | 1.45E-134 |
| ARC1B_HUMAN | 50.27 % | 366 | 5.94E-126 |