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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S3645.g05858.01.t

Possible name(s)

RPUSD1; RPUSD3; RPUSD4

Location

S3645 [4,899 / 9,078]

Sequences

Amino acid sequence

Length: 376

>Phfumi.CG.MTP2014.S3645.g05858.01.p
KEHPNLLCNFKQTQTVKLVTRTLRTRSRIVSHTSSILSEKVDTDETPSRKPHDVIHAVQR
SSDKFTVEKTTEESGFQKATPSKTGKDIAKEMRQKKLKSSPAGSGTEDNPVKRAVEAVKM
PDFKYVEDEAIVKLIRRHVIYADKKMVIFNKPYGLSVHDGDGVSKNVKQVLPMLSKMVYG
VSTNIPLNLCHRLDKNTTGVLVCATDPALESHIKKMFRMNLVTRKLWAILVGVPHPHMGI
VDIPIGEANTTDKISSRQYTRMVAKPTVKYDMMTGEETPRSFSKGSTAITKFRVMDSDRG
LSLVEFEPETGAKHQVRLHAADCLDCPILGDHKYSKMDSLAPQKLPENILSRFKLPQTKT
RYIPMHLHHSQILIPG

Nucleotide sequence

Length: 1,128

>Phfumi.CG.MTP2014.S3645.g05858.01.t
AAAGAACATCCAAACCTGTTATGCAACTTTAAACAAACTCAAACTGTTAAGTTGGTTACA
CGGACGTTACGAACTCGAAGTAGGATCGTATCACACACAAGTTCAATCTTATCTGAAAAA
GTTGACACTGATGAAACCCCTAGTCGAAAGCCACATGATGTTATTCACGCCGTTCAAAGA
TCATCTGACAAATTTACAGTTGAGAAAACAACTGAAGAAAGTGGATTTCAAAAAGCAACA
CCTTCCAAAACTGGAAAGGACATAGCAAAGGAAATGAGACAAAAGAAATTAAAATCCAGT
CCGGCTGGAAGTGGCACAGAAGATAACCCTGTGAAAAGAGCAGTCGAGGCTGTTAAAATG
CCAGATTTTAAATACGTTGAGGATGAAGCTATCGTCAAGCTGATCAGAAGACATGTCATC
TATGCCGATAAAAAAATGGTTATTTTCAACAAGCCGTATGGACTGTCAGTGCACGATGGT
GATGGCGTTTCCAAAAATGTAAAGCAAGTTCTTCCGATGTTGTCTAAGATGGTTTACGGG
GTTAGCACAAATATTCCACTAAACCTTTGCCACCGTTTGGATAAAAACACTACAGGTGTT
TTAGTGTGTGCAACCGATCCTGCGTTGGAAAGTCACATTAAGAAAATGTTTCGTATGAAT
CTTGTCACAAGAAAGCTCTGGGCGATCTTAGTTGGAGTTCCCCATCCACACATGGGAATT
GTGGATATTCCAATTGGTGAAGCAAACACCACTGATAAAATTTCATCCAGACAGTATACA
AGAATGGTTGCAAAGCCAACTGTAAAATATGACATGATGACTGGAGAGGAGACACCAAGG
TCATTTAGCAAAGGCAGTACGGCTATCACCAAGTTTCGTGTAATGGATTCCGACAGAGGT
TTATCACTTGTGGAATTTGAACCAGAAACAGGTGCAAAACATCAGGTCAGACTGCATGCA
GCTGACTGCTTGGATTGTCCCATCCTCGGCGATCACAAATATTCAAAGATGGACTCCTTA
GCTCCGCAAAAACTACCTGAGAACATTTTAAGTCGCTTCAAACTGCCTCAGACTAAAACT
CGATACATCCCCATGCATTTACATCACAGCCAAATACTCATACCAGGT

InterProScan

SUPERFAMILY
PsdUridine_synth_cat_dom_sf (IPR020103) - T[130-374] 6.72E-39
Pfam
PsdUridine_synth_RsuA/RluD (IPR006145) - T[146-321] 2.9E-23
CDD
PsdUridine_synth_RsuA/RluD (IPR006145) - T[146-374] 4.75169E-39
ProSitePatterns
PsdUridine_synth_RluC/D_CS (IPR006224) - T[190-204] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RUSD4_HUMAN 40.893 % 221 4.78E-69