- Transcript 'Phfumi.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S337.g01787.01.t
Possible name(s)
PRICKLE1; PRICKLE2; PRICKLE3
Gene model
Location
S337 [38,863 / 42,486]
Amino acid sequence
Length: 785
>Phfumi.CG.MTP2014.S337.g01787.01.p
MCWHPACFSCNVCQELLVDLFYFYQEGNLYCGRHHAETLKPRCSACDEIIFSDECTEAEG
RHWHMDHFCCFECDTVLGGQRYIMRDGKPNCTRCFEALYAEYCDMCGDLIGLDAGQMQYE
GQHWHATDKCFCCHRCRKSLLGRPFLPKSGRIFCSKSCSLGEDPCHSESDSQHSSSQYET
AQTPKSHNVRHSLNLENLAQRQSIGDSNVFMELDNCSPLASTEADHMRYADAAHPYLAVG
ASPLGNSPTTVATPRKSNASSTEDAVMSPSSTVSSRAKNGVPFPQGQNTYNSTDSSGYNS
SSTLDAIEHQNSMKMNAGAAFHPNLYRPSSNAKVTRLDKEVDDVGHVPATEFVPFQMNAH
MRSSPPIISGARKMSPEMQKTIDAFDNLSTSESQPPVKVGSALGNSIAPIPAPRARYPVS
HVPGPRKQSLDSENPWMRKTDIHESQRASPPRESPKAVVQRKGSERINHKNRCRDPINSF
ELSPSDEGKIFATTNLEEKDDVSLQSDLDKPGKELKSILKKTHSSVRHCHPPLSGSMDRI
DSFSKRPESDDEEDATGFGDARNDFSSFQRGKRFSASARMHPSEQGKQAKEKSQPRARFQ
ENSMALGRTHSALNLDEMNDAFLRFGGSKQKTCSKANCTSKTCSKKLKRTRSTDFAFERP
PPGSSRKSRKHRRFIEDEEDDGWCSTCTSSSDDSDYERWDRFEVGNKTPQSPNSIVRRLS
APNSVRVNVTKPRHSHPFLGEGAEFNAGFLTQSTHTNRPGMPRNYSTTSHMRYRRKQGKK
HCIVM
Nucleotide sequence
Length: 2,358
>Phfumi.CG.MTP2014.S337.g01787.01.t
ATGTGCTGGCATCCGGCCTGTTTCTCCTGCAACGTTTGTCAGGAGCTCCTTGTCGATCTC
TTCTACTTCTACCAGGAAGGAAATTTGTACTGCGGGCGCCACCACGCGGAAACTCTCAAA
CCTAGGTGTTCAGCCTGTGACGAGATCATTTTCTCCGACGAGTGCACAGAGGCCGAGGGC
AGACACTGGCACATGGATCATTTCTGCTGTTTCGAGTGCGACACCGTCCTCGGCGGCCAG
CGCTACATCATGCGCGACGGCAAGCCCAACTGCACGCGATGCTTCGAGGCTCTATACGCC
GAATACTGCGACATGTGTGGAGATCTAATCGGTTTGGATGCGGGCCAAATGCAGTACGAG
GGCCAGCACTGGCACGCAACCGACAAATGCTTTTGTTGCCATCGTTGCCGCAAGTCCTTG
CTTGGGAGACCCTTTCTGCCTAAGAGCGGGCGCATCTTCTGCTCCAAGTCGTGCAGCCTC
GGTGAAGATCCCTGCCACTCAGAATCCGATTCACAGCACAGTTCGTCGCAGTACGAGACC
GCGCAGACGCCCAAATCTCACAACGTGCGCCACAGTCTCAATCTCGAAAACTTGGCACAG
CGCCAATCCATCGGAGACTCCAACGTTTTCATGGAGCTTGACAACTGCTCGCCTTTGGCA
AGCACGGAAGCCGACCACATGCGCTATGCCGACGCTGCTCATCCCTACCTTGCCGTCGGG
GCTTCACCACTTGGGAATTCACCCACTACAGTGGCCACACCCCGCAAGTCCAACGCATCG
AGCACAGAAGACGCGGTTATGTCGCCGAGCAGCACTGTTTCGTCGCGGGCCAAAAACGGC
GTGCCCTTCCCGCAGGGGCAGAACACGTACAACAGTACGGACAGTAGCGGCTACAATAGC
AGCAGCACCTTGGACGCCATTGAGCATCAGAATAGCATGAAGATGAACGCCGGTGCTGCT
TTCCACCCCAACTTGTACCGACCTTCTTCAAACGCTAAAGTGACGCGCCTTGATAAGGAG
GTCGACGACGTTGGTCACGTGCCAGCCACAGAGTTTGTGCCGTTCCAAATGAACGCGCAT
ATGCGCAGCTCGCCGCCGATCATATCGGGCGCCCGCAAGATGTCGCCTGAAATGCAAAAG
ACCATTGATGCGTTTGACAACCTTTCAACGAGCGAGTCGCAGCCTCCGGTCAAGGTCGGA
TCAGCATTGGGGAATTCTATCGCCCCAATTCCGGCGCCCAGAGCCCGCTATCCTGTCTCA
CATGTCCCTGGTCCAAGGAAACAGTCGTTGGATTCCGAGAACCCGTGGATGCGGAAGACG
GACATCCATGAAAGCCAACGCGCCTCACCGCCAAGAGAAAGCCCCAAAGCTGTCGTGCAG
AGAAAGGGAAGTGAAAGAATCAACCATAAAAACCGTTGCCGCGATCCAATTAACTCGTTC
GAACTCTCTCCATCGGATGAGGGAAAGATATTTGCTACAACAAACCTTGAAGAAAAGGAT
GATGTCTCACTGCAATCAGACCTTGACAAACCGGGCAAAGAACTAAAAAGTATTTTGAAG
AAAACTCATTCGAGCGTCCGACACTGCCACCCTCCTCTATCCGGATCAATGGACAGAATC
GATTCTTTTTCCAAAAGACCCGAATCTGATGACGAGGAGGACGCCACGGGTTTCGGCGAC
GCCCGGAACGATTTTTCCAGCTTTCAACGTGGCAAGAGGTTTTCGGCAAGCGCTCGCATG
CATCCTTCGGAACAGGGCAAACAAGCCAAAGAAAAATCGCAGCCTAGAGCGCGCTTCCAA
GAAAACTCAATGGCCCTCGGTCGAACTCACAGTGCCCTCAACCTTGACGAGATGAACGAT
GCTTTCTTGCGGTTTGGTGGCTCCAAACAGAAGACTTGCAGCAAAGCTAATTGCACCAGC
AAAACATGCAGTAAGAAGTTAAAGCGGACGCGATCGACCGACTTTGCCTTCGAACGCCCC
CCTCCTGGCTCCTCCAGAAAGAGCAGAAAGCACCGGAGGTTCATTGAAGACGAAGAGGAT
GACGGCTGGTGCTCGACTTGTACGTCATCAAGCGACGACAGCGATTACGAGCGATGGGAC
CGATTTGAAGTCGGAAACAAAACGCCTCAGAGTCCCAACAGCATCGTGCGGCGTCTCTCC
GCTCCAAACAGCGTTCGCGTAAACGTTACCAAGCCCCGGCATTCCCACCCTTTCCTCGGC
GAAGGAGCCGAATTCAACGCCGGTTTCCTTACACAATCGACCCACACAAATCGTCCCGGC
ATGCCCAGGAACTACTCTACCACCTCTCATATGCGATACAGACGGAAACAAGGGAAGAAG
CATTGCATAGTGATGTGA
| ProSiteProfiles |
Znf_LIM (IPR001781) - T[1-40] 7.534 - T[41-101] 12.91 - T[102-165] 6.435 |
| SMART |
Znf_LIM (IPR001781) - T[1-34] 0.082 - T[42-94] 4.3E-14 - T[102-157] 4.4E-5 |
| Pfam |
Znf_LIM (IPR001781) - T[2-37] 9.1E-7 - T[43-97] 4.1E-10 - T[103-156] 3.8E-5 |
| CDD |
LIM2_prickle (IPR033726) - T[41-96] 6.72479E-38 |
| ProSitePatterns |
Znf_LIM (IPR001781) - T[43-77] . |
| CDD |
LIM3_prickle (IPR033727) - T[101-159] 3.86997E-37 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PRIC2_HUMAN | 70.43 % | 310 | 1.52E-93 |
| PRIC1_HUMAN | 71.186 % | 293 | 3.28E-87 |
| PRIC3_HUMAN | 73.006 % | 286 | 1.37E-86 |
