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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S732...' > 
  2. Clone 'ciht018a22' > 
  3. Transcript 'Cisavi.CG.ENS81.R12....' > 
  4. Transcript 'Haaura.CG.MTP2014.S2...' > 
  5. Transcript 'Phfumi.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S3286.g05593.01.t

Possible name(s)

TUBA1A; TUBA1B; TUBA3C

Gene model

Phfumi.CG.MTP2014.S3286.g05593

Location

S3286 [1,623 / 3,931]

Sequences

Amino acid sequence

Length: 340

>Phfumi.CG.MTP2014.S3286.g05593.01.p
QRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLVGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRT

Nucleotide sequence

Length: 1,020

>Phfumi.CG.MTP2014.S3286.g05593.01.t
CAGCGTGAATGTATCTCAATCCATGTTGGCCAAGCCGGTGTGCAGATCGGCAATGCTTGC
TGGGAGTTGTACTGCCTTGAGCATGGAATCCAGCCGGACGGCCAAATGCCGAGCGACAAG
ACCATTGGCGGGGGCGACGATTCCTTCAACACCTTCTTCAGCGAGACAGGAGCCGGAAAG
CACGTGCCCCGCGCTGTGTTTGTCGACCTCGAGCCAACAGTCGTCGACGAAGTTCGCACT
GGAACCTACCGTCAGCTTTTCCACCCGGAGCAGCTGATCACCGGTAAAGAGGATGCAGCG
AACAACTACGCTCGTGGTCACTACACCATCGGCAAAGAAATTGTCGACCTGGTCCTTGAC
CGCATCCGAAAGCTTGCTGACCAGTGCACTGGACTCCAGGGCTTCCTTATCTTCCATTCC
TTTGGAGGAGGGACCGGATCCGGATTCACCTCTCTTCTTATGGAGAGACTCTCTGTCGAC
TATGGCAAGAAATCCAAACTAGAATTTGCCATCTACCCAGCCCCACAGGTTTCCACCGCC
GTGGTCGAGCCATACAACTCGATCTTGACCACTCACACCACTCTTGAACACTCGGACTGT
GCCTTCATGGTCGACAACGAAGCCATCTACGACATTTGCCGACGTAACTTGGACATCGAG
CGACCAACCTACACTAACCTTAACCGGCTTGTTGGGCAGATCGTCTCCTCCATCACTGCT
TCACTGCGTTTTGATGGTGCCCTTAACGTCGATCTTACTGAATTCCAAACTAACTTGGTG
CCCTACCCACGTATTCACTTCCCATTGGCCACATACGCCCCGGTGATCTCAGCCGAGAAG
GCTTACCACGAGCAGCTCTCGGTCGCCGAAATCACCAACGCTTGCTTCGAGCCGGCCAAC
CAGATGGTGAAGTGCGATCCACGTCACGGCAAATACATGGCGTGCTGCATGTTGTATCGT
GGTGACGTTGTACCCAAAGATGTCAACGCAGCCATTGCTACTATCAAGACAAAGCGCACC

InterProScan

Gene3D
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-268] 4.3E-132
PANTHER
Tubulin (IPR000217) - T[2-340] 2.5E-242
SUPERFAMILY
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[2-244] 5.49E-101
Pfam
Tubulin_FtsZ_GTPase (IPR003008) - T[3-213] 2.0E-68
PRINTS
Tubulin (IPR000217) - T[10-30] 1.6E-76 - T[53-72] 1.6E-76 - T[95-106] 1.6E-76 - T[108-132] 1.6E-76 - T[134-152] 1.6E-76 - T[153-174] 1.6E-76 - T[178-191] 1.6E-76 - T[192-212] 1.6E-76
PRINTS
Alpha_tubulin (IPR002452) - T[18-33] 3.4E-75 - T[45-58] 3.4E-75 - T[88-101] 3.4E-75 - T[120-128] 3.4E-75 - T[148-160] 3.4E-75 - T[161-172] 3.4E-75 - T[214-226] 3.4E-75 - T[274-289] 3.4E-75 - T[321-340] 3.4E-75
SMART
Tubulin_FtsZ_GTPase (IPR003008) - T[49-246] 2.4E-83
ProSitePatterns
Tubulin_CS (IPR017975) - T[142-148] .
SUPERFAMILY
Tub_FtsZ_C (IPR008280) - T[246-339] 2.23E-37
SMART
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[248-340] 3.2E-15
Pfam
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[263-340] 5.2E-30
Gene3D
Tubulin/FtsZ_C_sf (IPR037103) - T[269-340] 4.2E-37

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TBA1A_HUMAN 98.23 % 706 0
TBA3C_HUMAN 99.115 % 706 0
TBA3D_HUMAN 99.115 % 706 0