Aniseed - Transcript Card

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S3194.g05520.04.t

Possible name(s)

CBR1; CBR3; RDH12

Gene model

Phfumi.CG.MTP2014.S3194.g05520

Location

S3194 [13,454 / 14,282]

Sequences

Amino acid sequence

Length: 275

>Phfumi.CG.MTP2014.S3194.g05520.04.p
MSASKVAVVTGSNKGIGFAIVKALCSKFNGDVYLTARKTDLGQEAVKKLEAEGLKVKFHQ
LDIDDEESIKKLCNDLLASHGGIDVLVNNAGIAYKVADQSPFGVQAKVTMKTNFFGTLNA
CKILIPIVRPGGRVVNVSSFVSKMTLNKCSPEVQKECRSDTITEEKLCRMINEFVDAAQT
GTHEALGFPTTGYGVSKLGVTVMTRIHARLMREQGKNDILINACCPGWVRTDMAGPKATK
SPEEGAETPVYLALLPDGATEPHGQFFSDKKIQQW

Nucleotide sequence

Length: 828

>Phfumi.CG.MTP2014.S3194.g05520.04.t
ATGTCAGCAAGCAAAGTAGCTGTGGTCACGGGTAGCAACAAAGGCATTGGTTTTGCCATT
GTCAAAGCTCTGTGCTCAAAATTTAATGGCGATGTTTATCTGACGGCTAGAAAAACTGAT
CTTGGCCAGGAGGCAGTCAAGAAGTTGGAGGCTGAGGGTTTGAAAGTTAAGTTTCACCAA
CTCGACATTGATGATGAAGAGAGCATTAAAAAGTTGTGCAACGACCTTTTGGCCTCGCAT
GGAGGAATTGATGTTCTTGTGAACAACGCAGGAATAGCTTACAAAGTGGCAGACCAATCA
CCATTCGGAGTCCAGGCAAAAGTCACCATGAAGACCAATTTCTTTGGAACACTGAATGCT
TGTAAAATCTTGATTCCCATTGTAAGGCCTGGTGGAAGAGTGGTCAATGTCTCTAGCTTT
GTCAGCAAGATGACATTAAACAAATGCAGCCCTGAAGTGCAGAAAGAGTGCCGATCAGAT
ACCATCACTGAAGAGAAGTTATGCCGTATGATAAACGAGTTTGTTGATGCTGCCCAAACT
GGAACCCATGAAGCTCTGGGATTCCCCACAACAGGTTATGGTGTCTCCAAGCTTGGTGTT
ACAGTGATGACAAGAATCCATGCAAGATTGATGAGAGAGCAAGGAAAAAATGACATCCTT
ATAAATGCCTGTTGTCCAGGTTGGGTTCGCACTGACATGGCGGGACCCAAGGCCACCAAA
AGTCCAGAGGAGGGTGCGGAGACCCCAGTCTACTTGGCTCTTCTGCCAGATGGCGCCACT
GAGCCACATGGTCAATTTTTTTCTGACAAAAAGATCCAACAATGGTAG

InterProScan

Pfam	SDR_fam (IPR002347) - T[5-147] 7.7E-29
SUPERFAMILY	NAD(P)-bd_dom_sf (IPR036291) - T[5-269] 6.82E-59
PRINTS	SDR_fam (IPR002347) - T[6-23] 1.1E-25 - T[81-92] 2.7E-9 - T[81-92] 1.1E-25 - T[126-142] 1.1E-25 - T[132-140] 2.7E-9 - T[193-212] 2.7E-9 - T[193-212] 1.1E-25 - T[217-234] 1.1E-25

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CBR1_HUMAN	62.909 %	366	1.17E-128
CBR3_HUMAN	53.091 %	301	2.84E-103