Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  2. Transcript 'KH2012:KH.C8.634.v2....' > 
  3. Transcript 'Cisavi.CG.ENS81.R19....' > 
  4. Transcript 'Haaura.CG.MTP2014.S3...' > 
  5. Transcript 'Phfumi.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S3194.g05520.02.t

Possible name(s)

CBR1; CBR3; RDH12

Gene model

Phfumi.CG.MTP2014.S3194.g05520

Location

S3194 [13,454 / 14,282]

Sequences

Amino acid sequence

Length: 167

>Phfumi.CG.MTP2014.S3194.g05520.02.p
MSASKVAVVTGSNKGIGFAIVKALCSKFNGDVYLTARKTDLGQEAVKKLEAEGLKVKFHQ
LDIDDEESIKKLCNDLLASHGGIDVLVNNAGIAYKVADQSPFGVQAKVTMKTNFFGTLNA
CKIDMAGPKATKSPEEGAETPVYLALLPDGATEPHGQFFSDKKIQQW

Nucleotide sequence

Length: 504

>Phfumi.CG.MTP2014.S3194.g05520.02.t
ATGTCAGCAAGCAAAGTAGCTGTGGTCACGGGTAGCAACAAAGGCATTGGTTTTGCCATT
GTCAAAGCTCTGTGCTCAAAATTTAATGGCGATGTTTATCTGACGGCTAGAAAAACTGAT
CTTGGCCAGGAGGCAGTCAAGAAGTTGGAGGCTGAGGGTTTGAAAGTTAAGTTTCACCAA
CTCGACATTGATGATGAAGAGAGCATTAAAAAGTTGTGCAACGACCTTTTGGCCTCGCAT
GGAGGAATTGATGTTCTTGTGAACAACGCAGGAATAGCTTACAAAGTGGCAGACCAATCA
CCATTCGGAGTCCAGGCAAAAGTCACCATGAAGACCAATTTCTTTGGAACACTGAATGCT
TGTAAAATTGACATGGCGGGACCCAAGGCCACCAAAAGTCCAGAGGAGGGTGCGGAGACC
CCAGTCTACTTGGCTCTTCTGCCAGATGGCGCCACTGAGCCACATGGTCAATTTTTTTCT
GACAAAAAGATCCAACAATGGTAG

InterProScan

Pfam
SDR_fam (IPR002347) - T[5-122] 4.8E-23
SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[5-161] 1.58E-31
PRINTS
SDR_fam (IPR002347) - T[6-23] 2.0E-11 - T[81-92] 2.0E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CBR1_HUMAN 63.333 % 156 4.06E-48
CBR3_HUMAN 55.833 % 145 1.67E-43