- Transcript 'Haaura.CG.MTP2014.S5...' >
- Transcript 'Cisavi.CG.ENS81.R77....' >
- EST 'BW408224' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Phfumi.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S3114.g05445.01.t
Possible name(s)
TRIM2; TRIM3; TRIM56
Gene model
Location
S3114 [2,387 / 9,072]
Amino acid sequence
Length: 774
>Phfumi.CG.MTP2014.S3114.g05445.01.p
MSPTRLRTRSVPDYNIFKENIRFAGHMMASSIDLLTKINDEFLTCQICFETYTKPKSLNC
QHTFCLKCLEEYTPPNSTEVICPTCRCEQPLTPQGINGLKDNFFISSMSDMLKTVKEIRS
EDKDGTSLMCDTCDHDSRKVAISRCLDCTDFLCTECSTWHIRTKLTRHHKIVSLTEFESG
IHNQELKSRAKIYCMIHDGEVAKIYCQSCQCPICHECVECGHSRHRRCSLKEEVLNQGHQ
IENLLKTAREKTDVLRTLQTTLKDLKQVKKNDRDSVEVEVEKTCEVFINAIHKRKQELID
ELHNMHATEIKHINADEDSVEMQLSSLVSCMEFSRKVLEYGTPKEVLGLNNQMTQILHQL
LETHPAHAYHKTEETDTISFDTNADASVRVIRDNLGKLNILKTAFAEQVNKVLRQLDSFC
ASDSALALKHNGKVHFHREESTETKLVLQLGKQGIADGEFESTPNLAVNSVNEVITADYD
GAKIQIFDGQGNFKDSFVTEVNKRMCKPAGIAILHNDDIAVCCEDQVHIWTHEGKSVLGF
GKGLFGNCSSIAVDVENRIIVADVGKHCIFIHTDDGKLVAQFGAQGKGESKLVEPRYVAS
DSQCNIIVSDGGDCSVKKFTAQGEFLLSFGAEGPERGQFQGPRGICTDRHDNILVADCWN
HRVDIFTPDGCFMRHIATDSLHFPWCITLTTNGKLVLSEDYSWSVKVFELPEYRNSSSMS
SMEEIISPTALIPDFDQLAGQFDLPNLLSNKVSWWLTSPNHHDSDHQQMNGIHN
Nucleotide sequence
Length: 2,322
>Phfumi.CG.MTP2014.S3114.g05445.01.t
ATGAGTCCAACAAGATTAAGAACGCGCTCGGTACCAGACTACAATATCTTCAAGGAAAAT
ATCAGGTTTGCCGGACATATGATGGCGAGTTCAATCGACTTGCTGACCAAGATCAACGAT
GAGTTTCTTACGTGCCAGATTTGCTTCGAAACTTATACTAAACCAAAAAGCCTCAACTGC
CAGCACACCTTCTGCCTGAAGTGCCTTGAAGAGTACACGCCGCCCAACAGTACGGAAGTG
ATCTGCCCCACCTGTCGATGCGAACAACCGCTCACTCCACAAGGAATCAACGGCCTCAAG
GACAATTTCTTCATCTCGAGTATGTCAGACATGCTAAAAACGGTGAAGGAAATTCGCAGT
GAAGACAAGGACGGCACCTCCCTCATGTGCGACACTTGCGACCACGACAGCCGCAAGGTG
GCAATATCACGTTGTTTGGATTGCACAGATTTCCTTTGCACGGAATGTTCGACTTGGCAC
ATCCGCACCAAGTTGACCAGGCATCATAAAATCGTTTCGCTTACAGAGTTTGAATCAGGA
ATCCACAACCAGGAGTTGAAGAGCAGAGCAAAAATATATTGCATGATACACGATGGGGAG
GTAGCTAAAATCTACTGCCAATCATGTCAATGCCCAATCTGCCACGAATGTGTGGAATGC
GGCCACTCCCGACATAGAAGATGCTCATTGAAAGAAGAAGTGTTAAACCAAGGGCACCAG
ATCGAAAATCTCCTTAAGACAGCGAGGGAGAAGACAGACGTGCTGCGAACACTGCAAACA
ACCTTGAAAGACCTCAAACAAGTGAAGAAAAATGACCGGGACAGTGTCGAAGTAGAGGTC
GAGAAGACCTGCGAAGTTTTTATCAACGCTATTCACAAGCGCAAGCAGGAATTGATCGAT
GAATTGCACAACATGCACGCAACTGAAATCAAGCACATAAACGCCGATGAGGATTCGGTC
GAGATGCAATTGAGCTCGTTGGTTTCCTGCATGGAATTTTCGCGAAAGGTTCTCGAGTAC
GGGACGCCAAAAGAAGTGTTGGGGTTGAACAACCAGATGACACAGATTCTTCACCAATTG
CTGGAGACGCATCCAGCTCACGCGTATCACAAGACAGAAGAAACTGACACAATTAGTTTT
GATACAAATGCCGATGCTAGTGTACGAGTGATAAGAGACAACCTGGGAAAACTGAACATT
CTTAAGACAGCATTCGCTGAACAAGTAAACAAGGTCCTGCGCCAGTTGGACTCATTTTGC
GCCTCAGACTCGGCACTTGCGCTCAAGCACAACGGCAAAGTTCACTTTCATCGGGAGGAA
TCGACCGAAACAAAACTTGTTTTGCAGCTCGGCAAACAAGGAATCGCGGATGGCGAGTTT
GAATCGACACCAAACCTTGCAGTGAACTCGGTGAATGAGGTTATCACCGCTGATTACGAC
GGAGCCAAGATTCAAATATTTGACGGGCAAGGAAACTTCAAAGACTCCTTCGTAACCGAA
GTTAACAAACGAATGTGCAAACCCGCTGGAATTGCTATTCTGCACAACGACGATATCGCT
GTGTGTTGCGAAGATCAAGTTCATATTTGGACGCACGAAGGAAAAAGTGTGCTTGGATTC
GGCAAAGGCTTGTTCGGAAACTGTTCCAGCATTGCTGTGGATGTCGAAAACCGAATAATT
GTGGCTGATGTGGGAAAACATTGCATTTTCATTCACACCGATGACGGGAAGTTGGTGGCG
CAGTTTGGGGCGCAAGGAAAGGGCGAAAGCAAATTAGTGGAACCTAGATACGTAGCCAGC
GACTCGCAATGCAATATCATCGTGTCAGACGGAGGTGACTGCAGCGTCAAAAAGTTCACG
GCACAAGGAGAATTCCTGTTAAGTTTTGGAGCGGAAGGACCAGAACGAGGGCAATTTCAA
GGCCCAAGGGGAATATGCACTGATCGTCATGACAACATACTGGTGGCAGATTGTTGGAAC
CACAGAGTTGACATATTTACACCTGATGGCTGCTTCATGCGTCATATCGCCACAGACAGT
CTTCACTTTCCCTGGTGCATTACGCTCACAACAAACGGAAAACTCGTACTGTCAGAAGAT
TACAGTTGGTCTGTGAAAGTTTTTGAACTTCCAGAATACCGCAACTCGTCGTCGATGTCG
TCTATGGAAGAAATAATATCACCAACAGCCTTAATACCGGACTTTGACCAACTAGCTGGT
CAATTTGATTTACCCAACTTGCTTAGCAATAAAGTATCGTGGTGGCTCACTTCACCAAAT
CACCACGATTCTGATCACCAGCAAATGAACGGCATTCACAAC
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[33-108] 5.0E-14 |
| Pfam |
Znf-RING_LisH (IPR027370) - T[45-83] 9.5E-8 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[45-86] 13.153 |
| SMART |
Znf_RING (IPR001841) - T[45-85] 3.7E-7 |
| ProSitePatterns |
Znf_RING_CS (IPR017907) - T[60-69] . |
| SMART |
Znf_B-box (IPR000315) - T[125-174] 0.012 - T[189-230] 8.9E-4 |
| ProSiteProfiles |
Znf_B-box (IPR000315) - T[125-174] 8.774 - T[189-230] 10.665 |
| Pfam |
Znf_B-box (IPR000315) - T[191-230] 8.1E-7 |
| CDD |
Znf_B-box (IPR000315) - T[192-230] 9.92336E-8 |
| Gene3D |
6-blade_b-propeller_TolB-like (IPR011042) - T[435-633] 2.9E-40 |
| ProSiteProfiles |
NHL_repeat_subgr (IPR013017) - T[447-490] 7.031 - T[534-575] 8.553 - T[579-622] 9.889 - T[626-669] 15.173 - T[670-711] 4.462 |
| Pfam |
NHL_repeat (IPR001258) - T[639-666] 6.7E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TRIM2_HUMAN | 24.017 % | 187 | 8.44E-50 |
| TRIM3_HUMAN | 32.734 % | 160 | 4.16E-41 |
| TRI56_HUMAN | 29.042 % | 148 | 4.44E-37 |