- Transcript 'KH2012:KH.S545.5.v1....' >
- Transcript 'Phfumi.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S2976.g05321.01.t
Possible name(s)
DMC1; RAD51; RAD51B
Gene model
Location
S2976 [7,559 / 11,026]
Amino acid sequence
Length: 334
>Phfumi.CG.MTP2014.S2976.g05321.01.p
QTMQAEENIAEEENIGPLPISKLEQNGISAHDIRKLQEHGYHSVEALAYAPKKELVSVKG
ISEAKADKIIIEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGFETGSITEI
FGEFRTGKTQICHTIAATCQLPIEQGGGEGKCMYIDTEGTFRPERLLAVAEKYGLNGADV
LDNVAYARAYNTDHQSQLLMQAAAMMSETRYAILIVDSATALYRTDYSGRGELSARQMHL
ARFLRTLLRLADEFGVAVIITNQVVAQVDGSAMFCADPKKPIGGNIMAHASTTRLYLRKG
RGETRICKIYDSPCLPEAEAMFSINADGIGDSKD
Nucleotide sequence
Length: 1,005
>Phfumi.CG.MTP2014.S2976.g05321.01.t
CAAACGATGCAAGCGGAAGAAAACATAGCTGAAGAAGAAAATATTGGTCCCTTACCAATA
TCTAAACTTGAGCAAAATGGAATCAGTGCACATGACATTCGAAAACTACAAGAACATGGC
TATCACTCTGTTGAGGCTCTGGCATATGCACCGAAAAAAGAACTGGTATCAGTAAAGGGC
ATCAGCGAGGCTAAAGCGGACAAAATAATTATTGAAGCGGCAAAGCTGGTGCCAATGGGT
TTCACAACTGCAACTGAATTCCATCAGCGTAGATCTGAGATTATTCAAATAACGACTGGG
TCTAAGGAACTGGACAAACTTTTACAAGGCGGATTTGAAACTGGATCTATCACTGAAATT
TTTGGGGAATTTCGTACAGGGAAGACACAAATTTGTCATACTATAGCAGCTACATGCCAG
CTGCCAATTGAACAAGGTGGAGGGGAAGGGAAATGTATGTACATAGACACCGAAGGAACA
TTTCGACCTGAGCGCCTCCTAGCTGTAGCTGAAAAATATGGTTTGAATGGTGCAGATGTG
TTGGACAATGTAGCTTATGCCAGGGCTTACAACACTGACCATCAATCTCAACTGCTAATG
CAAGCTGCTGCCATGATGTCTGAAACAAGGTATGCTATTTTAATAGTGGACAGCGCAACA
GCTTTGTACCGAACTGACTATAGCGGCAGAGGTGAACTATCTGCAAGACAAATGCACTTG
GCACGCTTCTTAAGAACATTACTTCGTCTGGCTGATGAGTTTGGAGTCGCCGTCATCATT
ACGAACCAGGTGGTAGCACAAGTGGATGGAAGTGCAATGTTCTGCGCCGACCCAAAAAAA
CCTATTGGTGGAAACATAATGGCCCATGCTTCCACAACAAGATTGTATCTACGAAAGGGC
CGAGGGGAGACAAGGATATGCAAAATATACGATTCGCCTTGTTTACCTGAAGCAGAGGCA
ATGTTTTCCATAAATGCTGATGGTATTGGTGACTCTAAGGATTGA
| PIRSF |
DNA_recomb/repair_RecA-like (IPR016467) - T[5-334] 9.3E-141 |
| SUPERFAMILY |
DNA_repair_Rad51/TF_NusA_a-hlx (IPR010995) - T[12-80] 2.98E-17 |
| TIGRFAM |
DNA_recomb/repair_Rad51 (IPR011941) - T[20-334] 1.4E-183 |
| Pfam |
DNA_recomb/repair_Rad51_C (IPR013632) - T[79-331] 6.1E-130 |
| ProSiteProfiles |
RecA_ATP-bd (IPR020588) - T[93-264] 49.374 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[96-330] 1.51E-61 |
| CDD |
Rad51_DMC1_RadA (IPR033925) - T[97-330] 1.77211E-146 |
| SMART |
AAA+_ATPase (IPR003593) - T[114-301] 3.5E-10 |
| ProSiteProfiles |
RecA_monomer-monomer_interface (IPR020587) - T[271-334] 20.51 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DMC1_HUMAN | 50.298 % | 330 | 1.58E-112 |
| RAD51_HUMAN | 84.776 % | 601 | 0 |
| RA51B_HUMAN | 27.515 % | 112 | 2.8E-28 |