- Transcript 'Phfumi.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S294.g01666.01.t
Possible name(s)
CRX; OTX1; OTX2
Gene model
Location
S294 [1,755 / 4,283]
Amino acid sequence
Length: 409
>Phfumi.CG.MTP2014.S294.g01666.01.p
MSYLKSPHYAMNGLGLGHDMNLLHPSVTYPGIQGMHQGAKNMQFGAPPVYSTTRKQRRER
TTFTRAQLDILEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQVQQQQQ
KQKSGNSSSTSSSTSSTNSNNNNKKKSPPTTPTPSTNGPVSSTSPFQQQSHQPAQPPAAP
SNHLPLPQAPSTSPVPGSPASSSGQSVPSVSSAAMMNGAGSTIAHQQGVHGGSIVQNNST
GNIWSPASVSPGASSDGASHVGGLGYAGVPATSSSPYMAAAAAVAHATHSPYAVSSNAQA
AATGGYPQNYPPSHSYFGSMEASYLPSVPFHAGGHTTGMGDMSMVGQQNAHPGSHHGSMQ
SHGAGHHQFMSQSYPYHASAAGGSLNSYSSVSDCVDYKDQTQGWKFQVL
Nucleotide sequence
Length: 1,230
>Phfumi.CG.MTP2014.S294.g01666.01.t
ATGTCGTACTTGAAGTCTCCACACTACGCCATGAACGGCCTAGGTTTGGGACATGACATG
AATCTACTTCACCCATCTGTTACTTATCCAGGCATTCAAGGAATGCATCAAGGAGCAAAG
AACATGCAATTTGGAGCCCCCCCAGTGTACAGCACAACTCGCAAACAACGTCGCGAGCGA
ACTACCTTTACTCGAGCACAATTGGACATCCTGGAAGCACTTTTCGGCAAAACCAGATAC
CCAGACATTTTTATGCGTGAAGAAGTGGCGTTGAAAATTAATCTACCAGAATCTCGTGTT
CAGGTTTGGTTTAAGAATCGCCGTGCAAAATGTCGTCAACAAGTTCAACAACAACAACAA
AAACAAAAATCGGGCAACAGCAGCAGCACCAGTTCAAGCACTAGCAGCACCAACAGCAAC
AATAACAACAAAAAGAAAAGTCCACCAACTACCCCAACACCGTCGACAAATGGACCAGTT
AGCAGCACATCGCCCTTCCAACAACAATCTCACCAACCAGCGCAACCACCAGCAGCACCC
AGCAACCATCTGCCCTTACCGCAAGCACCATCAACTTCGCCGGTACCTGGATCGCCAGCG
TCATCTAGCGGTCAATCAGTTCCCTCTGTTTCGTCAGCGGCCATGATGAACGGCGCAGGA
TCCACAATTGCTCACCAGCAGGGAGTGCACGGAGGCTCGATTGTACAAAACAACAGCACA
GGAAACATATGGAGCCCTGCTTCTGTTTCACCCGGGGCAAGTAGCGACGGAGCAAGCCAC
GTTGGAGGTCTTGGATACGCAGGTGTCCCCGCTACTAGCAGCTCGCCTTACATGGCCGCT
GCAGCTGCGGTAGCGCACGCCACTCATTCGCCGTACGCTGTGTCCAGCAACGCACAAGCT
GCTGCAACAGGTGGATATCCCCAGAACTACCCACCGTCCCATTCTTACTTCGGATCGATG
GAAGCGTCATACTTGCCTTCAGTGCCATTCCACGCGGGCGGACATACCACAGGTATGGGT
GACATGTCAATGGTCGGACAACAAAACGCGCACCCAGGAAGCCACCATGGATCAATGCAA
TCGCACGGGGCTGGACATCACCAATTCATGTCACAGTCATATCCGTACCACGCTAGCGCA
GCAGGTGGAAGCCTTAACTCCTACTCCTCGGTTTCTGACTGCGTTGACTACAAAGATCAA
ACCCAAGGCTGGAAATTTCAGGTCTTGTAA
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[42-114] 1.8E-23 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[54-114] 19.224 |
| SMART |
Homeobox_dom (IPR001356) - T[56-118] 1.2E-23 |
| CDD |
Homeobox_dom (IPR001356) - T[57-112] 2.22586E-23 |
| Pfam |
Homeobox_dom (IPR001356) - T[57-113] 2.1E-21 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[89-112] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| OTX2_HUMAN | 69.912 % | 161 | 1.38E-46 |
| OTX1_HUMAN | 70.94 % | 169 | 6.61E-49 |
| CRX_HUMAN | 57.522 % | 132 | 1.38E-35 |
