- Transcript 'Phfumi.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S292.g01661.01.t
Possible name(s)
NCOA7; OXR1; TLDC2
Gene model
Location
S292 [14,049 / 31,951]
Amino acid sequence
Length: 664
>Phfumi.CG.MTP2014.S292.g01661.01.p
QVQSRDTLRSIAVNFDTTTSKIMKNNRLSSTLIFPGQVLYVPNITDDPCHNDVDTPTSSS
FDGDFSFLKPLSVSPSQTMDKPSHQSYKLETFVDLSSQDDLKQCNPVDTISTKSQSSSSY
DIVYEIREGRRSSERDRIMSCDSNASETFEENFLKMKVCYLTQEQELVEGVLLITPTSLM
FDPNPLDPLAVAFGCDKFGIMCNMSSIISATMFNEKVDVLKYRSHNSHHSSFSNSSADKN
TQEPSSGMDPTIGDGLIELEEHVVTSEPVSLSEQFQSTGDIDKTDFVSDDQSSSKIAEDK
LMKEFPLLHHLAKTVEGMIPGTDTTNETDDDFPSAQTRDNMFFCVRSKLPMMKTFSRNNN
FDVKSEAEPDKKANEEPLKESWFKVHKSRSDQLLAFFMQWTPDPYAVDFAEQRGFVITDR
LAVDGNIQTKADASLDEKRGRSSTNASLEFVENFYSDAEIEKEWEIVSIEEARRRSTLNA
LELANDDNSLMPELLDSSNLLKDSSVLSLCKNLPARCVGCPWKLLYSTFEHGMSLRTLYR
KMNRLSEDSPVAIIVQDTEGHIFGAVSSCPPQVSEHFKGTGEAFLFTLEPTLQIYSWSGE
NMFFLKGDTDSLTIGGGDGLSGLWLDSDLCHGSSHTCLTFNNDVLSSSEDFFIQGVEVWG
FRDT
Nucleotide sequence
Length: 1,995
>Phfumi.CG.MTP2014.S292.g01661.01.t
CAGGTGCAAAGCAGGGACACGCTCCGAAGTATTGCAGTTAACTTTGACACAACAACATCA
AAAATTATGAAAAACAACAGACTGTCGTCAACCTTAATATTTCCAGGACAGGTGTTGTAT
GTTCCGAATATTACTGATGATCCTTGTCACAATGATGTTGATACACCAACATCATCATCA
TTCGATGGTGACTTCTCATTTCTCAAACCTCTTTCTGTTTCTCCATCCCAAACAATGGAC
AAACCAAGTCATCAGAGCTATAAATTGGAAACCTTTGTTGATCTTTCATCACAAGATGAT
TTGAAACAGTGCAACCCTGTTGATACAATTTCTACAAAATCTCAATCATCCTCTTCCTAT
GACATTGTCTATGAAATAAGAGAGGGTCGAAGATCATCAGAGAGAGATCGTATTATGTCA
TGTGATTCCAATGCATCAGAAACATTTGAAGAAAATTTTCTAAAGATGAAAGTGTGTTAC
CTTACGCAGGAACAGGAGTTGGTGGAAGGAGTTCTGTTGATCACACCAACATCACTGATG
TTTGACCCAAACCCACTTGACCCATTAGCTGTTGCGTTTGGTTGTGACAAGTTTGGGATT
ATGTGCAACATGTCATCGATAATCAGTGCTACTATGTTTAACGAAAAAGTGGATGTTCTT
AAGTACAGAAGTCACAACTCACACCATAGCAGTTTCAGCAACAGTTCAGCAGACAAAAAT
ACTCAGGAACCAAGTTCCGGAATGGATCCAACAATTGGGGATGGATTGATAGAGCTAGAA
GAACATGTGGTGACATCTGAACCTGTGTCTTTGTCTGAACAATTTCAATCCACTGGTGAC
ATTGACAAAACTGACTTTGTTTCTGATGATCAATCCAGCAGCAAAATTGCAGAAGACAAA
CTTATGAAGGAATTCCCACTCTTGCATCACTTAGCAAAAACTGTTGAAGGAATGATTCCT
GGTACTGACACCACAAATGAAACAGATGATGACTTTCCTTCTGCGCAAACAAGGGACAAT
ATGTTTTTCTGTGTTCGTTCAAAACTGCCTATGATGAAAACCTTTTCAAGAAATAATAAC
TTTGATGTGAAGAGTGAAGCAGAACCGGATAAAAAAGCAAATGAAGAACCGTTAAAAGAA
AGCTGGTTTAAAGTCCACAAAAGCAGATCTGACCAGCTTCTCGCGTTCTTCATGCAATGG
ACTCCCGACCCGTACGCGGTGGACTTTGCCGAGCAAAGGGGATTCGTGATCACTGACCGA
CTCGCTGTAGATGGCAACATACAAACAAAAGCCGATGCATCTCTGGACGAGAAACGCGGC
AGAAGCTCGACCAACGCCTCACTCGAGTTTGTCGAGAATTTCTACAGCGACGCAGAGATA
GAGAAAGAATGGGAGATTGTAAGCATTGAAGAGGCTAGAAGGCGATCCACGTTGAACGCG
CTTGAACTAGCAAATGACGACAATTCTTTAATGCCAGAACTTCTGGATTCCAGCAACCTC
CTGAAGGACTCAAGCGTGCTATCGTTATGTAAAAATCTCCCCGCGCGCTGCGTCGGCTGC
CCTTGGAAACTCCTCTACAGCACCTTCGAACATGGGATGAGCCTCCGTACATTGTACCGT
AAAATGAACCGACTTTCCGAAGATTCTCCAGTTGCCATCATTGTACAAGACACCGAAGGC
CACATATTCGGAGCAGTTTCGTCATGCCCTCCCCAGGTCAGCGAGCACTTTAAAGGCACT
GGTGAAGCGTTTCTTTTCACTCTGGAACCGACACTGCAAATTTACAGCTGGAGTGGGGAG
AACATGTTTTTCCTTAAAGGCGACACCGATTCGTTGACGATTGGCGGTGGAGACGGTCTG
TCTGGCTTGTGGTTGGATAGCGATCTCTGTCACGGAAGCAGCCACACTTGCCTTACATTC
AACAACGACGTTCTATCTTCCTCCGAGGATTTCTTTATCCAGGGCGTTGAGGTCTGGGGA
TTCCGAGACACGTGA
| ProSiteProfiles |
LysM_dom (IPR018392) - T[1-41] 11.445 |
| SMART |
LysM_dom (IPR018392) - T[1-42] 6.7E-6 |
| Gene3D |
LysM_dom_sf (IPR036779) - T[1-46] 1.0E-11 |
| CDD |
LysM_dom (IPR018392) - T[1-41] 8.41576E-9 |
| Pfam |
LysM_dom (IPR018392) - T[2-42] 3.8E-10 |
| SMART |
TLDc_dom (IPR006571) - T[498-662] 3.0E-56 |
| Pfam |
TLDc_dom (IPR006571) - T[524-661] 3.0E-35 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| OXR1_HUMAN | 38.81 % | 243 | 6.82E-70 |
| NCOA7_HUMAN | 40.95 % | 241 | 9.42E-69 |
| TLDC2_HUMAN | 46.154 % | 162 | 3.59E-46 |