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  1. Transcript 'Phfumi.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S2917.g05264.02.t

Possible name(s)

CEP78; NLRC3; NLRP14

Gene model

Phfumi.CG.MTP2014.S2917.g05264

Location

S2917 [9,030 / 11,219]

Sequences

Amino acid sequence

Length: 595

>Phfumi.CG.MTP2014.S2917.g05264.02.p
MANVPESVAVRQRGAFDFVGTYDNLCALQDTVPLVYVKAHVKEGVLDINGDRVRMIDWSP
ILNTIKINKNLRYIALRSYFQHSSVGTNAKKSHYFKRRTPAICFKDVTLLAARSLASCMS
ITKALKCVDLQGVPLRERDIEILAKGIAKNKTLTHVLLDYCQISDRGVAALCQSLKNHPS
ITHVSLAGCNITSIGASVISKLVKHQSTQRYSDAWAEGLRYRSPDLNCMAGIRRITLNSN
PMIGDPGIALIADALKDDLWLKALDLQNCGVSASGAKNLLTTIEHNRTLIVLDIRQNPMV
DNGTLRSVLGRVLLNANERDEAAFPWIKEEPPKDPYRTKKHRQPRSHSLCKKSIIAKRSS
PPDGVPSVLPAGHKGFVPWRTAVRASKHQLGLSDEEDDSDVLQLKILDEDSIDELNPKTS
GTQTQENKQNVTALKINLLDAQRRLIRAKENEEVLNQKVMTLEIENSRLRKELNSTLENS
RIKSQIEDEMLLESIDKSFNKFHEFLNMLSDMGLGSLAAAAGLDHTASQKPFSVRSKSTI
KGPQSRTNQVEVDDDQNEGEKMLESNAIVIEGTGKSEQKSDPKPKDDTESDSANS

Nucleotide sequence

Length: 1,785

>Phfumi.CG.MTP2014.S2917.g05264.02.t
ATGGCTAATGTTCCTGAAAGTGTAGCAGTTCGCCAGCGCGGTGCATTTGATTTTGTTGGA
ACTTACGACAACCTTTGCGCGTTGCAAGACACCGTACCGTTGGTTTATGTTAAAGCTCAT
GTGAAAGAAGGAGTTTTAGATATAAATGGTGACAGGGTTCGCATGATAGATTGGTCTCCG
ATACTTAATACCATAAAAATCAACAAAAACTTGAGATACATTGCTCTCAGAAGCTATTTC
CAGCATTCTTCAGTGGGTACAAATGCTAAGAAGTCACATTATTTTAAAAGGCGGACACCA
GCAATTTGTTTCAAAGATGTAACTCTCCTAGCTGCAAGATCCCTTGCATCATGTATGAGT
ATTACAAAAGCTTTGAAATGTGTGGATCTTCAAGGTGTGCCTCTACGGGAAAGAGATATT
GAAATTTTGGCAAAGGGAATTGCTAAAAATAAAACTCTTACTCATGTGTTACTTGACTAC
TGTCAAATTTCTGACCGAGGTGTTGCTGCATTGTGTCAATCGCTAAAAAATCACCCAAGC
ATTACACATGTAAGTCTTGCTGGATGCAATATAACATCCATTGGTGCCTCCGTTATCAGC
AAATTGGTCAAACATCAATCAACACAGAGATACAGTGATGCATGGGCCGAAGGTTTGAGA
TACAGATCTCCAGATTTGAATTGCATGGCTGGAATTCGCAGAATAACACTCAATTCCAAC
CCTATGATTGGCGATCCTGGTATAGCATTGATTGCTGATGCTTTAAAAGATGATTTGTGG
TTAAAAGCCCTGGATCTGCAAAATTGTGGAGTGTCAGCCAGTGGGGCTAAAAATTTGTTG
ACAACCATTGAACACAACAGAACTCTTATTGTGTTAGATATTCGCCAAAACCCTATGGTT
GACAATGGCACATTAAGAAGTGTTCTTGGCAGAGTGTTGCTCAATGCCAATGAAAGAGAT
GAAGCTGCATTTCCATGGATCAAGGAAGAACCTCCGAAAGATCCTTACAGGACCAAGAAG
CATAGACAGCCAAGGAGTCACTCACTTTGCAAGAAGAGCATTATCGCAAAAAGAAGCAGC
CCTCCTGATGGTGTGCCCTCTGTTTTGCCGGCCGGCCACAAGGGTTTTGTCCCATGGAGG
ACTGCTGTTCGAGCATCAAAACATCAGTTGGGCTTGTCTGATGAGGAAGATGACTCAGAT
GTACTACAGCTAAAAATTTTGGACGAAGATTCAATAGATGAACTTAACCCTAAGACTTCT
GGCACACAAACCCAAGAAAACAAACAGAATGTAACAGCTCTTAAGATAAATCTTTTAGAT
GCTCAGCGAAGGTTGATAAGAGCAAAAGAAAATGAGGAGGTGCTAAATCAAAAAGTCATG
ACTTTGGAGATTGAAAATTCAAGATTGAGAAAAGAATTAAACAGCACTTTGGAAAACTCA
AGGATTAAATCCCAAATTGAAGATGAGATGCTTTTGGAGAGCATCGATAAATCTTTTAAC
AAATTTCATGAATTTTTAAACATGTTAAGTGACATGGGTCTGGGATCACTTGCTGCTGCA
GCAGGACTTGACCACACAGCTTCACAAAAGCCGTTTTCAGTCAGGTCGAAATCCACAATC
AAAGGTCCTCAAAGCAGAACTAACCAAGTTGAGGTAGATGATGATCAAAATGAGGGAGAA
AAAATGTTGGAATCCAATGCCATAGTTATTGAAGGGACAGGCAAAAGTGAGCAGAAGTCT
GATCCAAAACCAAAAGATGATACAGAATCTGATTCTGCAAACAGT

InterProScan

Gene3D
LRR_dom_sf (IPR032675) - T[18-221] 1.9E-20 - T[229-315] 5.5E-13
Pfam
Leu-rich_rpt (IPR001611) - T[149-172] 0.028 - T[178-199] 0.46 - T[260-279] 0.58
PRINTS
Cep78 (IPR026212) - T[168-189] 6.4E-20 - T[191-206] 6.4E-20 - T[215-233] 6.4E-20 - T[253-272] 6.4E-20

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CEP78_HUMAN 38.2 % 392 3.12E-128